Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC21.54■■□□□ 1.04
RFX7Q2KHR2 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21.54■■□□□ 1.04
RFX7Q2KHR2 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFX7Q2KHR2 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFX7Q2KHR2 INTS4P1-201ENST00000438455 1935 ntBASIC21.54■■□□□ 1.04
RFX7Q2KHR2 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RFX7Q2KHR2 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFX7Q2KHR2 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC21.54■■□□□ 1.04
RFX7Q2KHR2 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
RFX7Q2KHR2 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
RFX7Q2KHR2 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC21.54■■□□□ 1.04
RFX7Q2KHR2 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RFX7Q2KHR2 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
RFX7Q2KHR2 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC21.54■■□□□ 1.04
RFX7Q2KHR2 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFX7Q2KHR2 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFX7Q2KHR2 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
RFX7Q2KHR2 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC21.53■■□□□ 1.04
RFX7Q2KHR2 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
RFX7Q2KHR2 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC21.53■■□□□ 1.04
RFX7Q2KHR2 AL355877.3-201ENST00000622820 899 ntBASIC21.53■■□□□ 1.04
RFX7Q2KHR2 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFX7Q2KHR2 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFX7Q2KHR2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
RFX7Q2KHR2 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.53■■□□□ 1.04
RFX7Q2KHR2 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
RFX7Q2KHR2 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFX7Q2KHR2 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
RFX7Q2KHR2 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
RFX7Q2KHR2 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RFX7Q2KHR2 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC21.53■■□□□ 1.04
RFX7Q2KHR2 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFX7Q2KHR2 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFX7Q2KHR2 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFX7Q2KHR2 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFX7Q2KHR2 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFX7Q2KHR2 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFX7Q2KHR2 THAP5-204ENST00000438865 868 ntTSL 2 BASIC21.52■■□□□ 1.04
RFX7Q2KHR2 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RFX7Q2KHR2 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC21.52■■□□□ 1.04
RFX7Q2KHR2 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC21.52■■□□□ 1.04
RFX7Q2KHR2 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC21.52■■□□□ 1.04
RFX7Q2KHR2 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RFX7Q2KHR2 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RFX7Q2KHR2 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFX7Q2KHR2 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC21.52■■□□□ 1.04
RFX7Q2KHR2 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC21.52■■□□□ 1.04
RFX7Q2KHR2 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC21.52■■□□□ 1.04
RFX7Q2KHR2 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.52■■□□□ 1.04
RFX7Q2KHR2 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFX7Q2KHR2 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC21.52■■□□□ 1.04
RFX7Q2KHR2 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC21.52■■□□□ 1.04
RFX7Q2KHR2 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFX7Q2KHR2 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFX7Q2KHR2 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
RFX7Q2KHR2 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
RFX7Q2KHR2 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
RFX7Q2KHR2 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RFX7Q2KHR2 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFX7Q2KHR2 NME9-203ENST00000383180 2133 ntTSL 2 BASIC21.51■■□□□ 1.03
RFX7Q2KHR2 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RFX7Q2KHR2 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFX7Q2KHR2 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
RFX7Q2KHR2 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
RFX7Q2KHR2 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFX7Q2KHR2 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC21.51■■□□□ 1.03
RFX7Q2KHR2 RBM17P3-201ENST00000417687 1192 ntBASIC21.51■■□□□ 1.03
RFX7Q2KHR2 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RFX7Q2KHR2 AC005104.2-201ENST00000427818 678 ntBASIC21.51■■□□□ 1.03
RFX7Q2KHR2 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
RFX7Q2KHR2 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC21.51■■□□□ 1.03
RFX7Q2KHR2 AP001005.1-201ENST00000571755 1248 ntBASIC21.51■■□□□ 1.03
RFX7Q2KHR2 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC21.51■■□□□ 1.03
RFX7Q2KHR2 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
RFX7Q2KHR2 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFX7Q2KHR2 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RFX7Q2KHR2 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC21.51■■□□□ 1.03
RFX7Q2KHR2 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC21.51■■□□□ 1.03
RFX7Q2KHR2 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RFX7Q2KHR2 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RFX7Q2KHR2 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFX7Q2KHR2 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
RFX7Q2KHR2 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFX7Q2KHR2 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RFX7Q2KHR2 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFX7Q2KHR2 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFX7Q2KHR2 TEX30-205ENST00000376029 959 ntTSL 2 BASIC21.5■■□□□ 1.03
RFX7Q2KHR2 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
RFX7Q2KHR2 DANCR-204ENST00000444958 709 ntTSL 3 BASIC21.5■■□□□ 1.03
RFX7Q2KHR2 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC21.5■■□□□ 1.03
RFX7Q2KHR2 SLC25A1P1-201ENST00000528351 927 ntBASIC21.5■■□□□ 1.03
RFX7Q2KHR2 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC21.5■■□□□ 1.03
RFX7Q2KHR2 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RFX7Q2KHR2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
RFX7Q2KHR2 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC21.5■■□□□ 1.03
RFX7Q2KHR2 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
RFX7Q2KHR2 LINC00304-203ENST00000565008 1864 ntBASIC21.5■■□□□ 1.03
RFX7Q2KHR2 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFX7Q2KHR2 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFX7Q2KHR2 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms