Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RSPO4Q2I0M5 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RSPO4Q2I0M5 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RSPO4Q2I0M5 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.21■□□□□ 0.35
RSPO4Q2I0M5 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RSPO4Q2I0M5 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.21■□□□□ 0.35
RSPO4Q2I0M5 DDX43P3-201ENST00000441064 443 ntBASIC17.21■□□□□ 0.35
RSPO4Q2I0M5 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.21■□□□□ 0.35
RSPO4Q2I0M5 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.21■□□□□ 0.35
RSPO4Q2I0M5 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.21■□□□□ 0.35
RSPO4Q2I0M5 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.21■□□□□ 0.35
RSPO4Q2I0M5 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.21■□□□□ 0.35
RSPO4Q2I0M5 AC009093.7-201ENST00000623853 1223 ntBASIC17.21■□□□□ 0.35
RSPO4Q2I0M5 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.21■□□□□ 0.35
RSPO4Q2I0M5 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RSPO4Q2I0M5 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.21■□□□□ 0.35
RSPO4Q2I0M5 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RSPO4Q2I0M5 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.2■□□□□ 0.34
RSPO4Q2I0M5 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RSPO4Q2I0M5 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RSPO4Q2I0M5 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RSPO4Q2I0M5 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RSPO4Q2I0M5 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RSPO4Q2I0M5 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.2■□□□□ 0.34
RSPO4Q2I0M5 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.2■□□□□ 0.34
RSPO4Q2I0M5 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RSPO4Q2I0M5 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RSPO4Q2I0M5 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.2■□□□□ 0.34
RSPO4Q2I0M5 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.2■□□□□ 0.34
RSPO4Q2I0M5 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.2■□□□□ 0.34
RSPO4Q2I0M5 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RSPO4Q2I0M5 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RSPO4Q2I0M5 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RSPO4Q2I0M5 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.2■□□□□ 0.34
RSPO4Q2I0M5 CRB3P1-201ENST00000449338 276 ntBASIC17.2■□□□□ 0.34
RSPO4Q2I0M5 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RSPO4Q2I0M5 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.2■□□□□ 0.34
RSPO4Q2I0M5 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.2■□□□□ 0.34
RSPO4Q2I0M5 AC084346.2-201ENST00000607097 949 ntBASIC17.2■□□□□ 0.34
RSPO4Q2I0M5 AD001527.2-201ENST00000622994 785 ntBASIC17.2■□□□□ 0.34
RSPO4Q2I0M5 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.2■□□□□ 0.34
RSPO4Q2I0M5 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.2■□□□□ 0.34
RSPO4Q2I0M5 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RSPO4Q2I0M5 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RSPO4Q2I0M5 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.2■□□□□ 0.34
RSPO4Q2I0M5 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.2■□□□□ 0.34
RSPO4Q2I0M5 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RSPO4Q2I0M5 AL024508.2-201ENST00000607749 1894 ntBASIC17.2■□□□□ 0.34
RSPO4Q2I0M5 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
RSPO4Q2I0M5 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RSPO4Q2I0M5 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.2■□□□□ 0.34
RSPO4Q2I0M5 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RSPO4Q2I0M5 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RSPO4Q2I0M5 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RSPO4Q2I0M5 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RSPO4Q2I0M5 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RSPO4Q2I0M5 AC099343.3-201ENST00000605834 2503 ntBASIC17.19■□□□□ 0.34
RSPO4Q2I0M5 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.19■□□□□ 0.34
RSPO4Q2I0M5 AC007952.6-201ENST00000573168 2673 ntBASIC17.19■□□□□ 0.34
RSPO4Q2I0M5 AC003957.1-201ENST00000625108 2673 ntBASIC17.19■□□□□ 0.34
RSPO4Q2I0M5 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RSPO4Q2I0M5 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RSPO4Q2I0M5 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.19■□□□□ 0.34
RSPO4Q2I0M5 AL627223.1-201ENST00000416693 442 ntBASIC17.19■□□□□ 0.34
RSPO4Q2I0M5 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.19■□□□□ 0.34
RSPO4Q2I0M5 NME2P1-201ENST00000426182 414 ntBASIC17.19■□□□□ 0.34
RSPO4Q2I0M5 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.19■□□□□ 0.34
RSPO4Q2I0M5 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
RSPO4Q2I0M5 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RSPO4Q2I0M5 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.19■□□□□ 0.34
RSPO4Q2I0M5 AC051619.7-201ENST00000568314 623 ntBASIC17.19■□□□□ 0.34
RSPO4Q2I0M5 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.19■□□□□ 0.34
RSPO4Q2I0M5 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.19■□□□□ 0.34
RSPO4Q2I0M5 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.19■□□□□ 0.34
RSPO4Q2I0M5 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.19■□□□□ 0.34
RSPO4Q2I0M5 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.19■□□□□ 0.34
RSPO4Q2I0M5 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RSPO4Q2I0M5 AC116562.4-201ENST00000641316 2276 ntBASIC17.19■□□□□ 0.34
RSPO4Q2I0M5 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RSPO4Q2I0M5 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RSPO4Q2I0M5 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RSPO4Q2I0M5 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RSPO4Q2I0M5 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RSPO4Q2I0M5 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RSPO4Q2I0M5 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RSPO4Q2I0M5 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.18■□□□□ 0.34
RSPO4Q2I0M5 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RSPO4Q2I0M5 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RSPO4Q2I0M5 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.18■□□□□ 0.34
RSPO4Q2I0M5 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RSPO4Q2I0M5 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RSPO4Q2I0M5 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.18■□□□□ 0.34
RSPO4Q2I0M5 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RSPO4Q2I0M5 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RSPO4Q2I0M5 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.18■□□□□ 0.34
RSPO4Q2I0M5 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.18■□□□□ 0.34
RSPO4Q2I0M5 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.18■□□□□ 0.34
RSPO4Q2I0M5 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.18■□□□□ 0.34
RSPO4Q2I0M5 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.18■□□□□ 0.34
RSPO4Q2I0M5 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms