Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 ADH5P3-201ENST00000433842 1137 ntBASIC17.26■□□□□ 0.35
CACNA1EQ15878 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.26■□□□□ 0.35
CACNA1EQ15878 RHOQP3-201ENST00000437982 621 ntBASIC17.26■□□□□ 0.35
CACNA1EQ15878 BCRP1-201ENST00000444246 691 ntBASIC17.26■□□□□ 0.35
CACNA1EQ15878 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
CACNA1EQ15878 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.26■□□□□ 0.35
CACNA1EQ15878 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.26■□□□□ 0.35
CACNA1EQ15878 AP002472.1-201ENST00000577490 586 ntBASIC17.26■□□□□ 0.35
CACNA1EQ15878 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.26■□□□□ 0.35
CACNA1EQ15878 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA1EQ15878 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA1EQ15878 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA1EQ15878 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA1EQ15878 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA1EQ15878 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.26■□□□□ 0.35
CACNA1EQ15878 AC020763.4-201ENST00000623414 4170 ntBASIC17.26■□□□□ 0.35
CACNA1EQ15878 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA1EQ15878 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.26■□□□□ 0.35
CACNA1EQ15878 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA1EQ15878 IGHV3-65-201ENST00000523210 341 ntBASIC17.26■□□□□ 0.35
CACNA1EQ15878 KRT19P2-202ENST00000557173 1012 ntBASIC17.26■□□□□ 0.35
CACNA1EQ15878 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.26■□□□□ 0.35
CACNA1EQ15878 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA1EQ15878 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA1EQ15878 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
CACNA1EQ15878 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA1EQ15878 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA1EQ15878 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
CACNA1EQ15878 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.25■□□□□ 0.35
CACNA1EQ15878 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.25■□□□□ 0.35
CACNA1EQ15878 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA1EQ15878 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CACNA1EQ15878 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
CACNA1EQ15878 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.25■□□□□ 0.35
CACNA1EQ15878 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.25■□□□□ 0.35
CACNA1EQ15878 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.25■□□□□ 0.35
CACNA1EQ15878 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.25■□□□□ 0.35
CACNA1EQ15878 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
CACNA1EQ15878 AC010507.1-201ENST00000633895 436 ntBASIC17.25■□□□□ 0.35
CACNA1EQ15878 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA1EQ15878 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.25■□□□□ 0.35
CACNA1EQ15878 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA1EQ15878 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA1EQ15878 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA1EQ15878 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA1EQ15878 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.25■□□□□ 0.35
CACNA1EQ15878 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA1EQ15878 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA1EQ15878 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CACNA1EQ15878 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CACNA1EQ15878 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA1EQ15878 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA1EQ15878 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CACNA1EQ15878 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.25■□□□□ 0.35
CACNA1EQ15878 HLA-J-202ENST00000469281 1241 ntBASIC17.25■□□□□ 0.35
CACNA1EQ15878 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.25■□□□□ 0.35
CACNA1EQ15878 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.25■□□□□ 0.35
CACNA1EQ15878 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA1EQ15878 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.25■□□□□ 0.35
CACNA1EQ15878 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA1EQ15878 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA1EQ15878 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.24■□□□□ 0.35
CACNA1EQ15878 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CACNA1EQ15878 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CACNA1EQ15878 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.24■□□□□ 0.35
CACNA1EQ15878 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CACNA1EQ15878 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CACNA1EQ15878 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.24■□□□□ 0.35
CACNA1EQ15878 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CACNA1EQ15878 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.24■□□□□ 0.35
CACNA1EQ15878 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CACNA1EQ15878 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CACNA1EQ15878 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CACNA1EQ15878 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.24■□□□□ 0.35
CACNA1EQ15878 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CACNA1EQ15878 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.24■□□□□ 0.35
CACNA1EQ15878 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.24■□□□□ 0.35
CACNA1EQ15878 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.24■□□□□ 0.35
CACNA1EQ15878 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.24■□□□□ 0.35
CACNA1EQ15878 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.24■□□□□ 0.35
CACNA1EQ15878 AC004706.3-202ENST00000621574 984 ntBASIC17.24■□□□□ 0.35
CACNA1EQ15878 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CACNA1EQ15878 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.24■□□□□ 0.35
CACNA1EQ15878 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CACNA1EQ15878 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.24■□□□□ 0.35
CACNA1EQ15878 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CACNA1EQ15878 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CACNA1EQ15878 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CACNA1EQ15878 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.24■□□□□ 0.35
CACNA1EQ15878 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CACNA1EQ15878 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CACNA1EQ15878 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CACNA1EQ15878 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.24■□□□□ 0.35
CACNA1EQ15878 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CACNA1EQ15878 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CACNA1EQ15878 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
CACNA1EQ15878 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CACNA1EQ15878 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CACNA1EQ15878 MIR4751-201ENST00000578027 74 ntBASIC17.24■□□□□ 0.35
CACNA1EQ15878 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms