Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDC42EP1Q00587 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.41■□□□□ 0.7
CDC42EP1Q00587 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.41■□□□□ 0.7
CDC42EP1Q00587 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDC42EP1Q00587 REXO1L9P-201ENST00000604264 2108 ntBASIC19.41■□□□□ 0.7
CDC42EP1Q00587 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.41■□□□□ 0.7
CDC42EP1Q00587 AC008735.5-201ENST00000623544 497 ntBASIC19.41■□□□□ 0.7
CDC42EP1Q00587 AC116407.3-201ENST00000623905 1129 ntBASIC19.41■□□□□ 0.7
CDC42EP1Q00587 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.41■□□□□ 0.7
CDC42EP1Q00587 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDC42EP1Q00587 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CDC42EP1Q00587 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.41■□□□□ 0.7
CDC42EP1Q00587 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDC42EP1Q00587 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.41■□□□□ 0.7
CDC42EP1Q00587 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDC42EP1Q00587 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CDC42EP1Q00587 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.4■□□□□ 0.7
CDC42EP1Q00587 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.4■□□□□ 0.7
CDC42EP1Q00587 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42EP1Q00587 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42EP1Q00587 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42EP1Q00587 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42EP1Q00587 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.4■□□□□ 0.7
CDC42EP1Q00587 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42EP1Q00587 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.4■□□□□ 0.7
CDC42EP1Q00587 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CDC42EP1Q00587 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CDC42EP1Q00587 AC003669.1-201ENST00000334569 611 ntBASIC19.4■□□□□ 0.7
CDC42EP1Q00587 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42EP1Q00587 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42EP1Q00587 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.4■□□□□ 0.7
CDC42EP1Q00587 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42EP1Q00587 PMS2P1-201ENST00000431037 1228 ntBASIC19.4■□□□□ 0.7
CDC42EP1Q00587 IGHV3-52-201ENST00000519770 353 ntBASIC19.4■□□□□ 0.7
CDC42EP1Q00587 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.4■□□□□ 0.7
CDC42EP1Q00587 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.4■□□□□ 0.7
CDC42EP1Q00587 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CDC42EP1Q00587 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
CDC42EP1Q00587 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.4■□□□□ 0.7
CDC42EP1Q00587 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.4■□□□□ 0.7
CDC42EP1Q00587 AC117500.6-201ENST00000624871 588 ntBASIC19.4■□□□□ 0.7
CDC42EP1Q00587 AF228730.7-201ENST00000641842 219 ntBASIC19.4■□□□□ 0.7
CDC42EP1Q00587 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42EP1Q00587 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.4■□□□□ 0.7
CDC42EP1Q00587 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42EP1Q00587 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42EP1Q00587 AC243591.1-201ENST00000452967 1364 ntBASIC19.4■□□□□ 0.7
CDC42EP1Q00587 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42EP1Q00587 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.4■□□□□ 0.7
CDC42EP1Q00587 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.4■□□□□ 0.7
CDC42EP1Q00587 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42EP1Q00587 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.4■□□□□ 0.7
CDC42EP1Q00587 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42EP1Q00587 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42EP1Q00587 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42EP1Q00587 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDC42EP1Q00587 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDC42EP1Q00587 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.39■□□□□ 0.7
CDC42EP1Q00587 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDC42EP1Q00587 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.39■□□□□ 0.69
CDC42EP1Q00587 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDC42EP1Q00587 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.39■□□□□ 0.69
CDC42EP1Q00587 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.39■□□□□ 0.69
CDC42EP1Q00587 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDC42EP1Q00587 MYCLP1-201ENST00000372451 1075 ntBASIC19.39■□□□□ 0.69
CDC42EP1Q00587 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
CDC42EP1Q00587 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.39■□□□□ 0.69
CDC42EP1Q00587 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
CDC42EP1Q00587 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.39■□□□□ 0.69
CDC42EP1Q00587 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.39■□□□□ 0.69
CDC42EP1Q00587 AC105339.3-201ENST00000560043 636 ntBASIC19.39■□□□□ 0.69
CDC42EP1Q00587 AC106730.1-201ENST00000566722 1090 ntBASIC19.39■□□□□ 0.69
CDC42EP1Q00587 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.39■□□□□ 0.69
CDC42EP1Q00587 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.39■□□□□ 0.69
CDC42EP1Q00587 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.39■□□□□ 0.69
CDC42EP1Q00587 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.39■□□□□ 0.69
CDC42EP1Q00587 MIR7706-201ENST00000613747 67 ntBASIC19.39■□□□□ 0.69
CDC42EP1Q00587 AL589182.2-201ENST00000619332 1049 ntBASIC19.39■□□□□ 0.69
CDC42EP1Q00587 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.39■□□□□ 0.69
CDC42EP1Q00587 PGM5P2-202ENST00000637225 1043 ntBASIC19.39■□□□□ 0.69
CDC42EP1Q00587 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.39■□□□□ 0.69
CDC42EP1Q00587 ZNF259P1-201ENST00000407656 1365 ntBASIC19.39■□□□□ 0.69
CDC42EP1Q00587 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.39■□□□□ 0.69
CDC42EP1Q00587 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.39■□□□□ 0.69
CDC42EP1Q00587 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.39■□□□□ 0.69
CDC42EP1Q00587 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.39■□□□□ 0.69
CDC42EP1Q00587 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.39■□□□□ 0.69
CDC42EP1Q00587 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.39■□□□□ 0.69
CDC42EP1Q00587 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDC42EP1Q00587 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDC42EP1Q00587 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDC42EP1Q00587 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CDC42EP1Q00587 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.38■□□□□ 0.69
CDC42EP1Q00587 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDC42EP1Q00587 RPL13AP23-201ENST00000480739 586 ntBASIC19.38■□□□□ 0.69
CDC42EP1Q00587 AC002558.1-201ENST00000488906 803 ntBASIC19.38■□□□□ 0.69
CDC42EP1Q00587 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDC42EP1Q00587 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.38■□□□□ 0.69
CDC42EP1Q00587 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.38■□□□□ 0.69
CDC42EP1Q00587 AC006557.2-201ENST00000592985 1240 ntBASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms