Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PRKDCP78527 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.36
PRKDCP78527 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
PRKDCP78527 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC12.77□□□□□ -0.36
PRKDCP78527 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
PRKDCP78527 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PRKDCP78527 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PRKDCP78527 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
PRKDCP78527 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PRKDCP78527 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC12.77□□□□□ -0.36
PRKDCP78527 AC009477.1-201ENST00000452936 217 ntBASIC12.77□□□□□ -0.36
PRKDCP78527 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.77□□□□□ -0.36
PRKDCP78527 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
PRKDCP78527 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC12.77□□□□□ -0.36
PRKDCP78527 BSG-214ENST00000614867 960 ntTSL 3 BASIC12.77□□□□□ -0.36
PRKDCP78527 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
PRKDCP78527 AC022144.1-201ENST00000602255 1580 ntBASIC12.77□□□□□ -0.37
PRKDCP78527 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PRKDCP78527 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PRKDCP78527 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PRKDCP78527 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PRKDCP78527 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PRKDCP78527 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
PRKDCP78527 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PRKDCP78527 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PRKDCP78527 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC12.77□□□□□ -0.37
PRKDCP78527 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PRKDCP78527 BCYRN1-201ENST00000418539 200 ntBASIC12.77□□□□□ -0.37
PRKDCP78527 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC12.77□□□□□ -0.37
PRKDCP78527 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
PRKDCP78527 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC12.77□□□□□ -0.37
PRKDCP78527 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC12.76□□□□□ -0.37
PRKDCP78527 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PRKDCP78527 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC12.76□□□□□ -0.37
PRKDCP78527 AC100803.2-201ENST00000562459 1963 ntBASIC12.76□□□□□ -0.37
PRKDCP78527 AC122714.2-201ENST00000502787 707 ntBASIC12.76□□□□□ -0.37
PRKDCP78527 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC12.76□□□□□ -0.37
PRKDCP78527 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRKDCP78527 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC12.76□□□□□ -0.37
PRKDCP78527 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRKDCP78527 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PRKDCP78527 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC12.76□□□□□ -0.37
PRKDCP78527 SPCS2P4-201ENST00000436160 681 ntBASIC12.76□□□□□ -0.37
PRKDCP78527 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.76□□□□□ -0.37
PRKDCP78527 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
PRKDCP78527 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC12.76□□□□□ -0.37
PRKDCP78527 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRKDCP78527 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
PRKDCP78527 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRKDCP78527 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PRKDCP78527 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
PRKDCP78527 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC12.76□□□□□ -0.37
PRKDCP78527 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC12.76□□□□□ -0.37
PRKDCP78527 AL138828.2-201ENST00000615812 383 ntBASIC12.76□□□□□ -0.37
PRKDCP78527 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC12.76□□□□□ -0.37
PRKDCP78527 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PRKDCP78527 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC12.75□□□□□ -0.37
PRKDCP78527 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC12.75□□□□□ -0.37
PRKDCP78527 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
PRKDCP78527 S100A2-206ENST00000497140 697 ntTSL 2 BASIC12.75□□□□□ -0.37
PRKDCP78527 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC12.75□□□□□ -0.37
PRKDCP78527 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
PRKDCP78527 NAA38-206ENST00000576384 424 ntTSL 2 BASIC12.75□□□□□ -0.37
PRKDCP78527 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
PRKDCP78527 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PRKDCP78527 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PRKDCP78527 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PRKDCP78527 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC12.75□□□□□ -0.37
PRKDCP78527 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PRKDCP78527 TBC1D3P5-201ENST00000579401 1545 ntBASIC12.75□□□□□ -0.37
PRKDCP78527 MYCLP1-201ENST00000372451 1075 ntBASIC12.75□□□□□ -0.37
PRKDCP78527 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
PRKDCP78527 PTPA-220ENST00000436883 532 ntTSL 4 BASIC12.75□□□□□ -0.37
PRKDCP78527 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
PRKDCP78527 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
PRKDCP78527 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.75□□□□□ -0.37
PRKDCP78527 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
PRKDCP78527 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
PRKDCP78527 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
PRKDCP78527 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
PRKDCP78527 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC12.75□□□□□ -0.37
PRKDCP78527 GATD1-206ENST00000526325 756 ntTSL 5 BASIC12.75□□□□□ -0.37
PRKDCP78527 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PRKDCP78527 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC12.75□□□□□ -0.37
PRKDCP78527 AC007064.4-201ENST00000637740 555 ntBASIC12.75□□□□□ -0.37
PRKDCP78527 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PRKDCP78527 AC100757.3-201ENST00000622361 1406 ntBASIC12.75□□□□□ -0.37
PRKDCP78527 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
PRKDCP78527 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
PRKDCP78527 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
PRKDCP78527 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
PRKDCP78527 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
PRKDCP78527 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
PRKDCP78527 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC12.74□□□□□ -0.37
PRKDCP78527 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC12.74□□□□□ -0.37
PRKDCP78527 SNX29P1-201ENST00000548357 1007 ntBASIC12.74□□□□□ -0.37
PRKDCP78527 USP48-205ENST00000421625 2818 ntTSL 2 BASIC12.74□□□□□ -0.37
PRKDCP78527 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
PRKDCP78527 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
PRKDCP78527 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms