Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
IRX4P78413 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
IRX4P78413 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
IRX4P78413 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.59■□□□□ 0.57
IRX4P78413 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
IRX4P78413 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
IRX4P78413 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
IRX4P78413 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
IRX4P78413 AP000593.1-201ENST00000393668 712 ntBASIC18.59■□□□□ 0.57
IRX4P78413 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.59■□□□□ 0.57
IRX4P78413 HLA-F-220ENST00000434407 884 ntBASIC18.59■□□□□ 0.57
IRX4P78413 LINC00265-3P-201ENST00000447588 903 ntBASIC18.59■□□□□ 0.57
IRX4P78413 AC079776.4-201ENST00000511039 504 ntBASIC18.59■□□□□ 0.57
IRX4P78413 FOSL1P1-201ENST00000511041 816 ntBASIC18.59■□□□□ 0.57
IRX4P78413 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.59■□□□□ 0.57
IRX4P78413 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.59■□□□□ 0.57
IRX4P78413 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
IRX4P78413 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
IRX4P78413 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.59■□□□□ 0.57
IRX4P78413 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
IRX4P78413 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
IRX4P78413 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
IRX4P78413 AC135776.1-201ENST00000319817 2481 ntBASIC18.59■□□□□ 0.57
IRX4P78413 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
IRX4P78413 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
IRX4P78413 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.59■□□□□ 0.57
IRX4P78413 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.58■□□□□ 0.57
IRX4P78413 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.58■□□□□ 0.57
IRX4P78413 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
IRX4P78413 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.58■□□□□ 0.57
IRX4P78413 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
IRX4P78413 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.58■□□□□ 0.57
IRX4P78413 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
IRX4P78413 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
IRX4P78413 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
IRX4P78413 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.58■□□□□ 0.56
IRX4P78413 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
IRX4P78413 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.58■□□□□ 0.56
IRX4P78413 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.58■□□□□ 0.56
IRX4P78413 DRAXINP1-201ENST00000437611 948 ntBASIC18.58■□□□□ 0.56
IRX4P78413 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.58■□□□□ 0.56
IRX4P78413 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
IRX4P78413 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
IRX4P78413 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
IRX4P78413 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
IRX4P78413 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
IRX4P78413 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
IRX4P78413 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
IRX4P78413 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.58■□□□□ 0.56
IRX4P78413 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
IRX4P78413 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.57■□□□□ 0.56
IRX4P78413 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
IRX4P78413 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IRX4P78413 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
IRX4P78413 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
IRX4P78413 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
IRX4P78413 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.57■□□□□ 0.56
IRX4P78413 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
IRX4P78413 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IRX4P78413 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
IRX4P78413 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
IRX4P78413 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
IRX4P78413 MIR662-201ENST00000384847 95 ntBASIC18.57■□□□□ 0.56
IRX4P78413 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
IRX4P78413 AL023284.2-201ENST00000405850 579 ntBASIC18.57■□□□□ 0.56
IRX4P78413 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.57■□□□□ 0.56
IRX4P78413 SEC1P-202ENST00000473944 940 ntBASIC18.57■□□□□ 0.56
IRX4P78413 KRT18P31-201ENST00000506277 1292 ntBASIC18.57■□□□□ 0.56
IRX4P78413 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.57■□□□□ 0.56
IRX4P78413 AL157888.1-201ENST00000631930 593 ntBASIC18.57■□□□□ 0.56
IRX4P78413 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
IRX4P78413 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IRX4P78413 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
IRX4P78413 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
IRX4P78413 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
IRX4P78413 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
IRX4P78413 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IRX4P78413 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.57■□□□□ 0.56
IRX4P78413 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
IRX4P78413 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IRX4P78413 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IRX4P78413 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
IRX4P78413 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IRX4P78413 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IRX4P78413 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
IRX4P78413 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
IRX4P78413 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.56■□□□□ 0.56
IRX4P78413 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
IRX4P78413 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.56■□□□□ 0.56
IRX4P78413 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
IRX4P78413 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
IRX4P78413 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
IRX4P78413 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IRX4P78413 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IRX4P78413 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IRX4P78413 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
IRX4P78413 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.56■□□□□ 0.56
IRX4P78413 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.56■□□□□ 0.56
IRX4P78413 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.56■□□□□ 0.56
IRX4P78413 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms