Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
RPL39P62891 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
RPL39P62891 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RPL39P62891 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RPL39P62891 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
RPL39P62891 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
RPL39P62891 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RPL39P62891 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RPL39P62891 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RPL39P62891 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RPL39P62891 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC12.65□□□□□ -0.38
RPL39P62891 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RPL39P62891 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RPL39P62891 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
RPL39P62891 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC12.65□□□□□ -0.38
RPL39P62891 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RPL39P62891 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC12.65□□□□□ -0.38
RPL39P62891 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RPL39P62891 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.39
RPL39P62891 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
RPL39P62891 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RPL39P62891 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
RPL39P62891 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC12.64□□□□□ -0.39
RPL39P62891 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC12.64□□□□□ -0.39
RPL39P62891 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC12.64□□□□□ -0.39
RPL39P62891 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RPL39P62891 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RPL39P62891 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RPL39P62891 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RPL39P62891 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RPL39P62891 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RPL39P62891 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
RPL39P62891 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
RPL39P62891 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RPL39P62891 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC12.64□□□□□ -0.39
RPL39P62891 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RPL39P62891 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RPL39P62891 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
RPL39P62891 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RPL39P62891 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC12.64□□□□□ -0.39
RPL39P62891 NAT14-202ENST00000587400 416 ntTSL 5 BASIC12.64□□□□□ -0.39
RPL39P62891 AC124016.1-201ENST00000609552 612 ntBASIC12.64□□□□□ -0.39
RPL39P62891 AL353708.3-201ENST00000610272 989 ntBASIC12.64□□□□□ -0.39
RPL39P62891 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
RPL39P62891 AC130371.2-201ENST00000619443 611 ntBASIC12.64□□□□□ -0.39
RPL39P62891 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RPL39P62891 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
RPL39P62891 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
RPL39P62891 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC12.64□□□□□ -0.39
RPL39P62891 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
RPL39P62891 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RPL39P62891 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
RPL39P62891 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RPL39P62891 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC12.64□□□□□ -0.39
RPL39P62891 PCDHA14-201ENST00000506751 2298 ntBASIC12.64□□□□□ -0.39
RPL39P62891 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RPL39P62891 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
RPL39P62891 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RPL39P62891 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RPL39P62891 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RPL39P62891 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RPL39P62891 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
RPL39P62891 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC12.64□□□□□ -0.39
RPL39P62891 CA12-203ENST00000422263 2556 ntTSL 2 BASIC12.64□□□□□ -0.39
RPL39P62891 AC046158.3-201ENST00000624947 2558 ntBASIC12.64□□□□□ -0.39
RPL39P62891 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RPL39P62891 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RPL39P62891 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RPL39P62891 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RPL39P62891 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RPL39P62891 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC12.64□□□□□ -0.39
RPL39P62891 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RPL39P62891 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RPL39P62891 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RPL39P62891 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC12.63□□□□□ -0.39
RPL39P62891 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
RPL39P62891 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC12.63□□□□□ -0.39
RPL39P62891 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RPL39P62891 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RPL39P62891 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
RPL39P62891 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RPL39P62891 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RPL39P62891 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
RPL39P62891 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RPL39P62891 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RPL39P62891 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
RPL39P62891 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
RPL39P62891 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RPL39P62891 AC011506.1-201ENST00000474329 610 ntBASIC12.63□□□□□ -0.39
RPL39P62891 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RPL39P62891 AC026271.3-201ENST00000571884 352 ntBASIC12.63□□□□□ -0.39
RPL39P62891 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC12.63□□□□□ -0.39
RPL39P62891 AC110285.5-201ENST00000611501 352 ntBASIC12.63□□□□□ -0.39
RPL39P62891 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RPL39P62891 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
RPL39P62891 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC12.63□□□□□ -0.39
RPL39P62891 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RPL39P62891 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC12.63□□□□□ -0.39
RPL39P62891 AC036111.1-201ENST00000533973 1582 ntBASIC12.63□□□□□ -0.39
RPL39P62891 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms