Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBE2D3P61077 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC12.74□□□□□ -0.37
UBE2D3P61077 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBE2D3P61077 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC12.74□□□□□ -0.37
UBE2D3P61077 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
UBE2D3P61077 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBE2D3P61077 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
UBE2D3P61077 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UBE2D3P61077 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBE2D3P61077 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC12.74□□□□□ -0.37
UBE2D3P61077 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC12.74□□□□□ -0.37
UBE2D3P61077 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC12.74□□□□□ -0.37
UBE2D3P61077 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UBE2D3P61077 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UBE2D3P61077 AC022211.2-201ENST00000585075 2527 ntBASIC12.74□□□□□ -0.37
UBE2D3P61077 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UBE2D3P61077 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBE2D3P61077 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBE2D3P61077 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBE2D3P61077 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBE2D3P61077 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBE2D3P61077 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBE2D3P61077 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UBE2D3P61077 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBE2D3P61077 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBE2D3P61077 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBE2D3P61077 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC12.74□□□□□ -0.37
UBE2D3P61077 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
UBE2D3P61077 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBE2D3P61077 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC12.74□□□□□ -0.37
UBE2D3P61077 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC12.73□□□□□ -0.37
UBE2D3P61077 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2D3P61077 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2D3P61077 AC006116.8-202ENST00000587620 1550 ntBASIC12.73□□□□□ -0.37
UBE2D3P61077 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC12.73□□□□□ -0.37
UBE2D3P61077 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2D3P61077 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2D3P61077 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
UBE2D3P61077 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC12.73□□□□□ -0.37
UBE2D3P61077 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2D3P61077 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2D3P61077 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2D3P61077 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC12.73□□□□□ -0.37
UBE2D3P61077 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2D3P61077 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC12.73□□□□□ -0.37
UBE2D3P61077 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2D3P61077 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC12.73□□□□□ -0.37
UBE2D3P61077 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC12.73□□□□□ -0.37
UBE2D3P61077 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2D3P61077 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC12.73□□□□□ -0.37
UBE2D3P61077 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2D3P61077 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC12.73□□□□□ -0.37
UBE2D3P61077 AL512604.3-201ENST00000569583 964 ntBASIC12.73□□□□□ -0.37
UBE2D3P61077 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC12.73□□□□□ -0.37
UBE2D3P61077 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC12.73□□□□□ -0.37
UBE2D3P61077 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2D3P61077 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC12.73□□□□□ -0.37
UBE2D3P61077 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
UBE2D3P61077 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2D3P61077 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2D3P61077 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2D3P61077 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
UBE2D3P61077 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
UBE2D3P61077 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2D3P61077 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2D3P61077 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2D3P61077 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2D3P61077 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
UBE2D3P61077 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC12.73□□□□□ -0.37
UBE2D3P61077 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
UBE2D3P61077 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2D3P61077 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D3P61077 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC12.72□□□□□ -0.37
UBE2D3P61077 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC12.72□□□□□ -0.37
UBE2D3P61077 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D3P61077 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
UBE2D3P61077 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D3P61077 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D3P61077 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC12.72□□□□□ -0.37
UBE2D3P61077 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D3P61077 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC12.72□□□□□ -0.37
UBE2D3P61077 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D3P61077 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D3P61077 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D3P61077 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D3P61077 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D3P61077 NME9-203ENST00000383180 2133 ntTSL 2 BASIC12.72□□□□□ -0.37
UBE2D3P61077 SEC1P-202ENST00000473944 940 ntBASIC12.72□□□□□ -0.37
UBE2D3P61077 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC12.72□□□□□ -0.37
UBE2D3P61077 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC12.72□□□□□ -0.37
UBE2D3P61077 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D3P61077 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC12.72□□□□□ -0.37
UBE2D3P61077 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC12.72□□□□□ -0.37
UBE2D3P61077 AC008687.5-201ENST00000593746 558 ntBASIC12.72□□□□□ -0.37
UBE2D3P61077 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC12.72□□□□□ -0.37
UBE2D3P61077 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D3P61077 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D3P61077 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
UBE2D3P61077 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D3P61077 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms