Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CKS1BP61024 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CKS1BP61024 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CKS1BP61024 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CKS1BP61024 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CKS1BP61024 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CKS1BP61024 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CKS1BP61024 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CKS1BP61024 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CKS1BP61024 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CKS1BP61024 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC12.55□□□□□ -0.4
CKS1BP61024 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CKS1BP61024 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CKS1BP61024 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC12.55□□□□□ -0.4
CKS1BP61024 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CKS1BP61024 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CKS1BP61024 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CKS1BP61024 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CKS1BP61024 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
CKS1BP61024 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC12.54□□□□□ -0.4
CKS1BP61024 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CKS1BP61024 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CKS1BP61024 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC12.54□□□□□ -0.4
CKS1BP61024 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
CKS1BP61024 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
CKS1BP61024 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CKS1BP61024 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CKS1BP61024 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CKS1BP61024 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CKS1BP61024 KATNBL1P6-202ENST00000562413 1466 ntBASIC12.54□□□□□ -0.4
CKS1BP61024 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC12.54□□□□□ -0.4
CKS1BP61024 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC12.54□□□□□ -0.4
CKS1BP61024 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CKS1BP61024 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC12.54□□□□□ -0.4
CKS1BP61024 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CKS1BP61024 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
CKS1BP61024 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CKS1BP61024 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CKS1BP61024 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CKS1BP61024 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CKS1BP61024 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CKS1BP61024 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC12.54□□□□□ -0.4
CKS1BP61024 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CKS1BP61024 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CKS1BP61024 PPP1R14BP2-201ENST00000426284 444 ntBASIC12.54□□□□□ -0.4
CKS1BP61024 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC12.54□□□□□ -0.4
CKS1BP61024 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC12.54□□□□□ -0.4
CKS1BP61024 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC12.54□□□□□ -0.4
CKS1BP61024 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC12.54□□□□□ -0.4
CKS1BP61024 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CKS1BP61024 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC12.54□□□□□ -0.4
CKS1BP61024 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC12.54□□□□□ -0.4
CKS1BP61024 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
CKS1BP61024 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC12.54□□□□□ -0.4
CKS1BP61024 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC12.54□□□□□ -0.4
CKS1BP61024 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC12.54□□□□□ -0.4
CKS1BP61024 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CKS1BP61024 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
CKS1BP61024 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CKS1BP61024 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CKS1BP61024 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CKS1BP61024 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CKS1BP61024 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC12.54□□□□□ -0.4
CKS1BP61024 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.54□□□□□ -0.4
CKS1BP61024 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CKS1BP61024 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CKS1BP61024 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CKS1BP61024 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CKS1BP61024 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CKS1BP61024 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
CKS1BP61024 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CKS1BP61024 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC12.53□□□□□ -0.4
CKS1BP61024 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CKS1BP61024 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CKS1BP61024 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CKS1BP61024 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC12.53□□□□□ -0.4
CKS1BP61024 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
CKS1BP61024 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC12.53□□□□□ -0.4
CKS1BP61024 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CKS1BP61024 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CKS1BP61024 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CKS1BP61024 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CKS1BP61024 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
CKS1BP61024 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CKS1BP61024 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CKS1BP61024 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC12.53□□□□□ -0.4
CKS1BP61024 GLI3-203ENST00000437480 451 ntTSL 2 BASIC12.53□□□□□ -0.4
CKS1BP61024 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC12.53□□□□□ -0.4
CKS1BP61024 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC12.53□□□□□ -0.4
CKS1BP61024 RGMA-211ENST00000557420 989 ntTSL 3 BASIC12.53□□□□□ -0.4
CKS1BP61024 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CKS1BP61024 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC12.53□□□□□ -0.4
CKS1BP61024 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CKS1BP61024 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
CKS1BP61024 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CKS1BP61024 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CKS1BP61024 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CKS1BP61024 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CKS1BP61024 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CKS1BP61024 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms