Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDKN2DP55273 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.64■□□□□ 0.41
CDKN2DP55273 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.64■□□□□ 0.41
CDKN2DP55273 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.64■□□□□ 0.41
CDKN2DP55273 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
CDKN2DP55273 AC005332.3-201ENST00000589904 676 ntBASIC17.64■□□□□ 0.41
CDKN2DP55273 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDKN2DP55273 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.64■□□□□ 0.41
CDKN2DP55273 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
CDKN2DP55273 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CDKN2DP55273 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKN2DP55273 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKN2DP55273 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKN2DP55273 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.64■□□□□ 0.41
CDKN2DP55273 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.64■□□□□ 0.41
CDKN2DP55273 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.64■□□□□ 0.41
CDKN2DP55273 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKN2DP55273 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.64■□□□□ 0.41
CDKN2DP55273 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDKN2DP55273 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.63■□□□□ 0.41
CDKN2DP55273 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDKN2DP55273 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDKN2DP55273 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDKN2DP55273 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CDKN2DP55273 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDKN2DP55273 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDKN2DP55273 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDKN2DP55273 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.63■□□□□ 0.41
CDKN2DP55273 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDKN2DP55273 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.63■□□□□ 0.41
CDKN2DP55273 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDKN2DP55273 AL390719.2-201ENST00000606993 987 ntBASIC17.63■□□□□ 0.41
CDKN2DP55273 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CDKN2DP55273 AC083849.1-201ENST00000615227 514 ntBASIC17.63■□□□□ 0.41
CDKN2DP55273 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.63■□□□□ 0.41
CDKN2DP55273 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDKN2DP55273 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CDKN2DP55273 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.63■□□□□ 0.41
CDKN2DP55273 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDKN2DP55273 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDKN2DP55273 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CDKN2DP55273 SIRPAP1-201ENST00000448467 1770 ntBASIC17.63■□□□□ 0.41
CDKN2DP55273 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDKN2DP55273 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDKN2DP55273 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CDKN2DP55273 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.62■□□□□ 0.41
CDKN2DP55273 AC106820.2-201ENST00000563775 3264 ntBASIC17.62■□□□□ 0.41
CDKN2DP55273 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.62■□□□□ 0.41
CDKN2DP55273 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.62■□□□□ 0.41
CDKN2DP55273 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.62■□□□□ 0.41
CDKN2DP55273 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDKN2DP55273 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDKN2DP55273 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDKN2DP55273 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CDKN2DP55273 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDKN2DP55273 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDKN2DP55273 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDKN2DP55273 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDKN2DP55273 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.62■□□□□ 0.41
CDKN2DP55273 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.62■□□□□ 0.41
CDKN2DP55273 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.62■□□□□ 0.41
CDKN2DP55273 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.62■□□□□ 0.41
CDKN2DP55273 DDX43P3-201ENST00000441064 443 ntBASIC17.62■□□□□ 0.41
CDKN2DP55273 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
CDKN2DP55273 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.62■□□□□ 0.41
CDKN2DP55273 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDKN2DP55273 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CDKN2DP55273 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDKN2DP55273 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.62■□□□□ 0.41
CDKN2DP55273 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDKN2DP55273 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDKN2DP55273 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDKN2DP55273 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDKN2DP55273 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDKN2DP55273 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CDKN2DP55273 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDKN2DP55273 HLA-J-201ENST00000462773 1622 ntBASIC17.61■□□□□ 0.41
CDKN2DP55273 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CDKN2DP55273 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDKN2DP55273 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CDKN2DP55273 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.61■□□□□ 0.41
CDKN2DP55273 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDKN2DP55273 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDKN2DP55273 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDKN2DP55273 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.61■□□□□ 0.41
CDKN2DP55273 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.61■□□□□ 0.41
CDKN2DP55273 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CDKN2DP55273 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.61■□□□□ 0.41
CDKN2DP55273 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDKN2DP55273 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDKN2DP55273 MTCL1P1-201ENST00000446207 792 ntBASIC17.61■□□□□ 0.41
CDKN2DP55273 AC068472.1-201ENST00000474589 881 ntBASIC17.61■□□□□ 0.41
CDKN2DP55273 DUX4L26-201ENST00000489078 1255 ntBASIC17.61■□□□□ 0.41
CDKN2DP55273 AC022616.7-201ENST00000525383 220 ntBASIC17.61■□□□□ 0.41
CDKN2DP55273 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.61■□□□□ 0.41
CDKN2DP55273 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.61■□□□□ 0.41
CDKN2DP55273 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.61■□□□□ 0.41
CDKN2DP55273 AC012313.1-201ENST00000593393 3059 ntBASIC17.61■□□□□ 0.41
CDKN2DP55273 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CDKN2DP55273 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms