Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NR1H2P55055 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NR1H2P55055 OR6D1P-203ENST00000641209 4860 ntBASIC16.96■□□□□ 0.31
NR1H2P55055 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NR1H2P55055 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NR1H2P55055 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NR1H2P55055 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NR1H2P55055 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NR1H2P55055 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NR1H2P55055 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.96■□□□□ 0.31
NR1H2P55055 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.96■□□□□ 0.31
NR1H2P55055 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.96■□□□□ 0.31
NR1H2P55055 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.96■□□□□ 0.31
NR1H2P55055 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NR1H2P55055 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
NR1H2P55055 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NR1H2P55055 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.96■□□□□ 0.31
NR1H2P55055 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NR1H2P55055 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NR1H2P55055 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
NR1H2P55055 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NR1H2P55055 FLJ38576-201ENST00000623820 2459 ntBASIC16.96■□□□□ 0.31
NR1H2P55055 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
NR1H2P55055 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NR1H2P55055 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.96■□□□□ 0.3
NR1H2P55055 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.96■□□□□ 0.3
NR1H2P55055 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
NR1H2P55055 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.96■□□□□ 0.3
NR1H2P55055 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
NR1H2P55055 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.96■□□□□ 0.3
NR1H2P55055 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
NR1H2P55055 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NR1H2P55055 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NR1H2P55055 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NR1H2P55055 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
NR1H2P55055 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
NR1H2P55055 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
NR1H2P55055 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
NR1H2P55055 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NR1H2P55055 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NR1H2P55055 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
NR1H2P55055 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NR1H2P55055 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NR1H2P55055 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NR1H2P55055 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
NR1H2P55055 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
NR1H2P55055 LINC01568-207ENST00000641790 1380 ntBASIC16.95■□□□□ 0.3
NR1H2P55055 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
NR1H2P55055 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
NR1H2P55055 TMPOP1-202ENST00000424642 1267 ntBASIC16.95■□□□□ 0.3
NR1H2P55055 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.95■□□□□ 0.3
NR1H2P55055 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.95■□□□□ 0.3
NR1H2P55055 RN7SL850P-201ENST00000579959 291 ntBASIC16.95■□□□□ 0.3
NR1H2P55055 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.95■□□□□ 0.3
NR1H2P55055 AL445228.2-201ENST00000605589 952 ntBASIC16.95■□□□□ 0.3
NR1H2P55055 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
NR1H2P55055 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.95■□□□□ 0.3
NR1H2P55055 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.95■□□□□ 0.3
NR1H2P55055 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
NR1H2P55055 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NR1H2P55055 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
NR1H2P55055 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
NR1H2P55055 PCDHA1-201ENST00000378133 2726 ntBASIC16.95■□□□□ 0.3
NR1H2P55055 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.95■□□□□ 0.3
NR1H2P55055 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.95■□□□□ 0.3
NR1H2P55055 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NR1H2P55055 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
NR1H2P55055 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.95■□□□□ 0.3
NR1H2P55055 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.94■□□□□ 0.3
NR1H2P55055 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
NR1H2P55055 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NR1H2P55055 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.94■□□□□ 0.3
NR1H2P55055 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
NR1H2P55055 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.94■□□□□ 0.3
NR1H2P55055 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.94■□□□□ 0.3
NR1H2P55055 AC103702.1-201ENST00000548801 2630 ntBASIC16.94■□□□□ 0.3
NR1H2P55055 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NR1H2P55055 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.94■□□□□ 0.3
NR1H2P55055 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.94■□□□□ 0.3
NR1H2P55055 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.94■□□□□ 0.3
NR1H2P55055 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.94■□□□□ 0.3
NR1H2P55055 C2orf69P3-201ENST00000565542 1120 ntBASIC16.94■□□□□ 0.3
NR1H2P55055 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
NR1H2P55055 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.94■□□□□ 0.3
NR1H2P55055 AC092865.7-201ENST00000641832 219 ntBASIC16.94■□□□□ 0.3
NR1H2P55055 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.94■□□□□ 0.3
NR1H2P55055 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
NR1H2P55055 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NR1H2P55055 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NR1H2P55055 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NR1H2P55055 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NR1H2P55055 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.94■□□□□ 0.3
NR1H2P55055 AC008556.1-201ENST00000610908 2040 ntBASIC16.94■□□□□ 0.3
NR1H2P55055 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NR1H2P55055 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.94■□□□□ 0.3
NR1H2P55055 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
NR1H2P55055 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
NR1H2P55055 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
NR1H2P55055 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NR1H2P55055 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms