Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMSP52788 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.74■□□□□ 0.27
SMSP52788 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMSP52788 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMSP52788 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.74■□□□□ 0.27
SMSP52788 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMSP52788 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMSP52788 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMSP52788 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMSP52788 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMSP52788 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMSP52788 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMSP52788 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMSP52788 AP000593.1-201ENST00000393668 712 ntBASIC16.74■□□□□ 0.27
SMSP52788 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SMSP52788 SPDYE13P-201ENST00000445314 798 ntBASIC16.74■□□□□ 0.27
SMSP52788 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.74■□□□□ 0.27
SMSP52788 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SMSP52788 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.74■□□□□ 0.27
SMSP52788 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SMSP52788 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMSP52788 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SMSP52788 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.74■□□□□ 0.27
SMSP52788 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMSP52788 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMSP52788 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMSP52788 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SMSP52788 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.74■□□□□ 0.27
SMSP52788 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.74■□□□□ 0.27
SMSP52788 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
SMSP52788 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.74■□□□□ 0.27
SMSP52788 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SMSP52788 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMSP52788 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.73■□□□□ 0.27
SMSP52788 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMSP52788 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SMSP52788 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SMSP52788 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SMSP52788 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
SMSP52788 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.73■□□□□ 0.27
SMSP52788 GMCL1P1-201ENST00000463439 1581 ntBASIC16.73■□□□□ 0.27
SMSP52788 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMSP52788 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMSP52788 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMSP52788 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SMSP52788 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.73■□□□□ 0.27
SMSP52788 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SMSP52788 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SMSP52788 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.73■□□□□ 0.27
SMSP52788 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SMSP52788 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.73■□□□□ 0.27
SMSP52788 AC092597.1-201ENST00000487352 616 ntBASIC16.73■□□□□ 0.27
SMSP52788 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.73■□□□□ 0.27
SMSP52788 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.73■□□□□ 0.27
SMSP52788 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SMSP52788 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.73■□□□□ 0.27
SMSP52788 LINC01711-201ENST00000598340 967 ntBASIC16.73■□□□□ 0.27
SMSP52788 AC024243.1-201ENST00000609234 778 ntBASIC16.73■□□□□ 0.27
SMSP52788 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SMSP52788 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMSP52788 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.73■□□□□ 0.27
SMSP52788 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.73■□□□□ 0.27
SMSP52788 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMSP52788 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMSP52788 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SMSP52788 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SMSP52788 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SMSP52788 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMSP52788 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.73■□□□□ 0.27
SMSP52788 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.73■□□□□ 0.27
SMSP52788 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMSP52788 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SMSP52788 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SMSP52788 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMSP52788 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.73■□□□□ 0.27
SMSP52788 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMSP52788 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMSP52788 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMSP52788 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
SMSP52788 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.72■□□□□ 0.27
SMSP52788 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.72■□□□□ 0.27
SMSP52788 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SMSP52788 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SMSP52788 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMSP52788 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SMSP52788 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SMSP52788 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SMSP52788 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SMSP52788 AL845331.1-201ENST00000424978 1190 ntBASIC16.72■□□□□ 0.27
SMSP52788 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMSP52788 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SMSP52788 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
SMSP52788 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.72■□□□□ 0.27
SMSP52788 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SMSP52788 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.72■□□□□ 0.27
SMSP52788 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMSP52788 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMSP52788 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SMSP52788 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMSP52788 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms