Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.69■□□□□ 0.74
GPC3P51654 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.69■□□□□ 0.74
GPC3P51654 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.69■□□□□ 0.74
GPC3P51654 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GPC3P51654 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GPC3P51654 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GPC3P51654 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.69■□□□□ 0.74
GPC3P51654 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GPC3P51654 HLA-A-201ENST00000376802 1334 ntBASIC19.69■□□□□ 0.74
GPC3P51654 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
GPC3P51654 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
GPC3P51654 AC007613.1-201ENST00000572811 2597 ntBASIC19.69■□□□□ 0.74
GPC3P51654 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GPC3P51654 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GPC3P51654 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
GPC3P51654 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.69■□□□□ 0.74
GPC3P51654 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.69■□□□□ 0.74
GPC3P51654 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GPC3P51654 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GPC3P51654 AC138932.1-201ENST00000534164 6830 ntBASIC19.68■□□□□ 0.74
GPC3P51654 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.68■□□□□ 0.74
GPC3P51654 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GPC3P51654 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GPC3P51654 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GPC3P51654 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.68■□□□□ 0.74
GPC3P51654 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.68■□□□□ 0.74
GPC3P51654 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
GPC3P51654 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GPC3P51654 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.68■□□□□ 0.74
GPC3P51654 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GPC3P51654 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GPC3P51654 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GPC3P51654 RBM17P3-201ENST00000417687 1192 ntBASIC19.68■□□□□ 0.74
GPC3P51654 AP000347.1-202ENST00000435868 847 ntBASIC19.68■□□□□ 0.74
GPC3P51654 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
GPC3P51654 FGFR3P6-201ENST00000457012 610 ntBASIC19.68■□□□□ 0.74
GPC3P51654 DUTP2-201ENST00000519164 463 ntBASIC19.68■□□□□ 0.74
GPC3P51654 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.68■□□□□ 0.74
GPC3P51654 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
GPC3P51654 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GPC3P51654 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GPC3P51654 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
GPC3P51654 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GPC3P51654 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
GPC3P51654 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.68■□□□□ 0.74
GPC3P51654 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GPC3P51654 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
GPC3P51654 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GPC3P51654 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
GPC3P51654 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GPC3P51654 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GPC3P51654 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GPC3P51654 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.68■□□□□ 0.74
GPC3P51654 REXO1L9P-201ENST00000604264 2108 ntBASIC19.67■□□□□ 0.74
GPC3P51654 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.67■□□□□ 0.74
GPC3P51654 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GPC3P51654 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GPC3P51654 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
GPC3P51654 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.67■□□□□ 0.74
GPC3P51654 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
GPC3P51654 RNA5SP419-201ENST00000515908 135 ntBASIC19.67■□□□□ 0.74
GPC3P51654 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.67■□□□□ 0.74
GPC3P51654 MTDHP3-201ENST00000594186 672 ntBASIC19.67■□□□□ 0.74
GPC3P51654 HCG11-201ENST00000411553 5696 ntBASIC19.67■□□□□ 0.74
GPC3P51654 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.67■□□□□ 0.74
GPC3P51654 AC097374.2-201ENST00000618617 1306 ntBASIC19.67■□□□□ 0.74
GPC3P51654 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GPC3P51654 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GPC3P51654 KRT8P47-201ENST00000604727 1398 ntBASIC19.67■□□□□ 0.74
GPC3P51654 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GPC3P51654 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
GPC3P51654 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
GPC3P51654 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
GPC3P51654 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GPC3P51654 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
GPC3P51654 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
GPC3P51654 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.66■□□□□ 0.74
GPC3P51654 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GPC3P51654 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.66■□□□□ 0.74
GPC3P51654 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GPC3P51654 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
GPC3P51654 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GPC3P51654 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GPC3P51654 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GPC3P51654 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GPC3P51654 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
GPC3P51654 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GPC3P51654 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GPC3P51654 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GPC3P51654 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GPC3P51654 KRT18P67-201ENST00000432816 1264 ntBASIC19.66■□□□□ 0.74
GPC3P51654 AC007967.3-201ENST00000434308 558 ntBASIC19.66■□□□□ 0.74
GPC3P51654 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.66■□□□□ 0.74
GPC3P51654 AC079776.4-201ENST00000511039 504 ntBASIC19.66■□□□□ 0.74
GPC3P51654 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.66■□□□□ 0.74
GPC3P51654 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.66■□□□□ 0.74
GPC3P51654 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
GPC3P51654 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.66■□□□□ 0.74
GPC3P51654 AC064862.7-201ENST00000604520 867 ntBASIC19.66■□□□□ 0.74
GPC3P51654 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms