Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
MRE11P49959 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
MRE11P49959 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
MRE11P49959 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
MRE11P49959 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
MRE11P49959 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC20.83■□□□□ 0.92
MRE11P49959 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC20.83■□□□□ 0.92
MRE11P49959 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
MRE11P49959 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
MRE11P49959 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
MRE11P49959 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MRE11P49959 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MRE11P49959 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MRE11P49959 PHGDH-209ENST00000641074 1780 ntBASIC20.82■□□□□ 0.92
MRE11P49959 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC20.82■□□□□ 0.92
MRE11P49959 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
MRE11P49959 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
MRE11P49959 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MRE11P49959 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC20.82■□□□□ 0.92
MRE11P49959 AL355312.1-201ENST00000407115 2176 ntBASIC20.82■□□□□ 0.92
MRE11P49959 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
MRE11P49959 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
MRE11P49959 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MRE11P49959 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
MRE11P49959 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.82■□□□□ 0.92
MRE11P49959 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MRE11P49959 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MRE11P49959 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MRE11P49959 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MRE11P49959 AP000593.1-201ENST00000393668 712 ntBASIC20.82■□□□□ 0.92
MRE11P49959 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
MRE11P49959 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.82■□□□□ 0.92
MRE11P49959 AL355355.2-201ENST00000442321 338 ntBASIC20.82■□□□□ 0.92
MRE11P49959 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.82■□□□□ 0.92
MRE11P49959 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
MRE11P49959 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.82■□□□□ 0.92
MRE11P49959 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC20.82■□□□□ 0.92
MRE11P49959 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
MRE11P49959 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MRE11P49959 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MRE11P49959 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MRE11P49959 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MRE11P49959 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MRE11P49959 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MRE11P49959 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
MRE11P49959 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MRE11P49959 AC073508.3-201ENST00000619697 1419 ntBASIC20.81■□□□□ 0.92
MRE11P49959 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MRE11P49959 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MRE11P49959 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MRE11P49959 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.81■□□□□ 0.92
MRE11P49959 KRT18P16-201ENST00000510337 1294 ntBASIC20.81■□□□□ 0.92
MRE11P49959 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.81■□□□□ 0.92
MRE11P49959 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MRE11P49959 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.81■□□□□ 0.92
MRE11P49959 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
MRE11P49959 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC20.81■□□□□ 0.92
MRE11P49959 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
MRE11P49959 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.81■□□□□ 0.92
MRE11P49959 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MRE11P49959 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MRE11P49959 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC20.81■□□□□ 0.92
MRE11P49959 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
MRE11P49959 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MRE11P49959 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.81■□□□□ 0.92
MRE11P49959 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.81■□□□□ 0.92
MRE11P49959 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
MRE11P49959 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MRE11P49959 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MRE11P49959 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
MRE11P49959 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
MRE11P49959 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
MRE11P49959 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MRE11P49959 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MRE11P49959 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
MRE11P49959 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
MRE11P49959 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
MRE11P49959 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
MRE11P49959 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
MRE11P49959 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MRE11P49959 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.8■□□□□ 0.92
MRE11P49959 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MRE11P49959 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
MRE11P49959 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
MRE11P49959 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.8■□□□□ 0.92
MRE11P49959 DUSP5P1-201ENST00000441325 1139 ntBASIC20.8■□□□□ 0.92
MRE11P49959 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.8■□□□□ 0.92
MRE11P49959 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
MRE11P49959 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.8■□□□□ 0.92
MRE11P49959 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MRE11P49959 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.8■□□□□ 0.92
MRE11P49959 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.8■□□□□ 0.92
MRE11P49959 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC20.8■□□□□ 0.92
MRE11P49959 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
MRE11P49959 LINC01568-207ENST00000641790 1380 ntBASIC20.8■□□□□ 0.92
MRE11P49959 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC20.8■□□□□ 0.92
MRE11P49959 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
MRE11P49959 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
MRE11P49959 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
MRE11P49959 OS9-205ENST00000413095 1660 ntTSL 2 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms