Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDC34P49427 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDC34P49427 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.13□□□□□ -0.15
CDC34P49427 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
CDC34P49427 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CDC34P49427 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDC34P49427 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.13□□□□□ -0.15
CDC34P49427 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.13□□□□□ -0.15
CDC34P49427 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDC34P49427 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDC34P49427 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDC34P49427 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.13□□□□□ -0.15
CDC34P49427 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDC34P49427 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
CDC34P49427 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC14.12□□□□□ -0.15
CDC34P49427 PCDHB19P-201ENST00000570871 2371 ntBASIC14.12□□□□□ -0.15
CDC34P49427 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC34P49427 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.12□□□□□ -0.15
CDC34P49427 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC34P49427 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
CDC34P49427 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.12□□□□□ -0.15
CDC34P49427 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC34P49427 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC34P49427 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC34P49427 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDC34P49427 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.12□□□□□ -0.15
CDC34P49427 AL163051.1-201ENST00000569214 1512 ntBASIC14.12□□□□□ -0.15
CDC34P49427 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC34P49427 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC34P49427 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDC34P49427 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC34P49427 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC34P49427 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC14.12□□□□□ -0.15
CDC34P49427 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDC34P49427 AC004951.3-201ENST00000418645 1148 ntBASIC14.12□□□□□ -0.15
CDC34P49427 AC004980.1-204ENST00000429707 299 ntBASIC14.12□□□□□ -0.15
CDC34P49427 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC14.12□□□□□ -0.15
CDC34P49427 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC14.12□□□□□ -0.15
CDC34P49427 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC14.12□□□□□ -0.15
CDC34P49427 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC14.12□□□□□ -0.15
CDC34P49427 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC14.12□□□□□ -0.15
CDC34P49427 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC14.12□□□□□ -0.15
CDC34P49427 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC14.12□□□□□ -0.15
CDC34P49427 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC34P49427 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDC34P49427 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC34P49427 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC34P49427 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC34P49427 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.12□□□□□ -0.15
CDC34P49427 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CDC34P49427 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC34P49427 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.12□□□□□ -0.15
CDC34P49427 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CDC34P49427 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC34P49427 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC14.12□□□□□ -0.15
CDC34P49427 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC34P49427 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC34P49427 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC34P49427 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.12□□□□□ -0.15
CDC34P49427 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC34P49427 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC34P49427 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC34P49427 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDC34P49427 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
CDC34P49427 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC34P49427 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC34P49427 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDC34P49427 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC34P49427 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC34P49427 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC34P49427 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDC34P49427 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDC34P49427 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDC34P49427 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC34P49427 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC34P49427 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDC34P49427 KIRREL3-AS3-201ENST00000404882 831 ntBASIC14.11□□□□□ -0.15
CDC34P49427 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.11□□□□□ -0.15
CDC34P49427 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CDC34P49427 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CDC34P49427 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CDC34P49427 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CDC34P49427 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC14.11□□□□□ -0.15
CDC34P49427 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC14.11□□□□□ -0.15
CDC34P49427 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC14.11□□□□□ -0.15
CDC34P49427 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC14.11□□□□□ -0.15
CDC34P49427 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC14.11□□□□□ -0.15
CDC34P49427 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CDC34P49427 AC106886.4-201ENST00000623557 2502 ntBASIC14.11□□□□□ -0.15
CDC34P49427 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CDC34P49427 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.11□□□□□ -0.15
CDC34P49427 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC34P49427 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC34P49427 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC34P49427 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC34P49427 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.11□□□□□ -0.15
CDC34P49427 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC34P49427 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.11□□□□□ -0.15
CDC34P49427 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC14.11□□□□□ -0.15
CDC34P49427 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms