Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
ATP6V1AP38606 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
ATP6V1AP38606 SP100-208ENST00000427101 1922 ntTSL 2 BASIC22.62■■□□□ 1.21
ATP6V1AP38606 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
ATP6V1AP38606 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC22.62■■□□□ 1.21
ATP6V1AP38606 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
ATP6V1AP38606 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC22.62■■□□□ 1.21
ATP6V1AP38606 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC22.62■■□□□ 1.21
ATP6V1AP38606 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC22.62■■□□□ 1.21
ATP6V1AP38606 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ATP6V1AP38606 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
ATP6V1AP38606 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ATP6V1AP38606 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC22.61■■□□□ 1.21
ATP6V1AP38606 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
ATP6V1AP38606 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
ATP6V1AP38606 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ATP6V1AP38606 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
ATP6V1AP38606 AC003669.1-201ENST00000334569 611 ntBASIC22.61■■□□□ 1.21
ATP6V1AP38606 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
ATP6V1AP38606 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC22.61■■□□□ 1.21
ATP6V1AP38606 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
ATP6V1AP38606 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC22.61■■□□□ 1.21
ATP6V1AP38606 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC22.61■■□□□ 1.21
ATP6V1AP38606 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ATP6V1AP38606 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC22.61■■□□□ 1.21
ATP6V1AP38606 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC22.61■■□□□ 1.21
ATP6V1AP38606 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC22.61■■□□□ 1.21
ATP6V1AP38606 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC22.61■■□□□ 1.21
ATP6V1AP38606 CIPC-205ENST00000555437 566 ntTSL 3 BASIC22.61■■□□□ 1.21
ATP6V1AP38606 PDPK2P-202ENST00000562415 1191 ntBASIC22.61■■□□□ 1.21
ATP6V1AP38606 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
ATP6V1AP38606 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC22.61■■□□□ 1.21
ATP6V1AP38606 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC22.61■■□□□ 1.21
ATP6V1AP38606 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC22.61■■□□□ 1.21
ATP6V1AP38606 AC027612.4-201ENST00000605371 583 ntBASIC22.61■■□□□ 1.21
ATP6V1AP38606 AC010654.1-201ENST00000615722 808 ntBASIC22.61■■□□□ 1.21
ATP6V1AP38606 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC22.61■■□□□ 1.21
ATP6V1AP38606 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
ATP6V1AP38606 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC22.61■■□□□ 1.21
ATP6V1AP38606 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC22.61■■□□□ 1.21
ATP6V1AP38606 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
ATP6V1AP38606 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ATP6V1AP38606 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ATP6V1AP38606 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
ATP6V1AP38606 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
ATP6V1AP38606 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC22.6■■□□□ 1.21
ATP6V1AP38606 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ATP6V1AP38606 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
ATP6V1AP38606 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC22.6■■□□□ 1.21
ATP6V1AP38606 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC22.6■■□□□ 1.21
ATP6V1AP38606 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC22.6■■□□□ 1.21
ATP6V1AP38606 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ATP6V1AP38606 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ATP6V1AP38606 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ATP6V1AP38606 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
ATP6V1AP38606 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC22.6■■□□□ 1.21
ATP6V1AP38606 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC22.6■■□□□ 1.21
ATP6V1AP38606 AC092364.2-202ENST00000597012 1073 ntBASIC22.6■■□□□ 1.21
ATP6V1AP38606 AC010507.1-201ENST00000633895 436 ntBASIC22.6■■□□□ 1.21
ATP6V1AP38606 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
ATP6V1AP38606 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
ATP6V1AP38606 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ATP6V1AP38606 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ATP6V1AP38606 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
ATP6V1AP38606 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
ATP6V1AP38606 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC22.6■■□□□ 1.21
ATP6V1AP38606 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
ATP6V1AP38606 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
ATP6V1AP38606 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
ATP6V1AP38606 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
ATP6V1AP38606 MRPL20P1-201ENST00000400819 433 ntBASIC22.59■■□□□ 1.21
ATP6V1AP38606 FAM8A3P-201ENST00000427218 844 ntBASIC22.59■■□□□ 1.21
ATP6V1AP38606 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC22.59■■□□□ 1.21
ATP6V1AP38606 POLD4-207ENST00000531239 584 ntTSL 2 BASIC22.59■■□□□ 1.21
ATP6V1AP38606 PUS1-205ENST00000535067 838 ntTSL 3 BASIC22.59■■□□□ 1.21
ATP6V1AP38606 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC22.59■■□□□ 1.21
ATP6V1AP38606 CD63-210ENST00000550776 870 ntTSL 5 BASIC22.59■■□□□ 1.21
ATP6V1AP38606 RIN3-211ENST00000557762 517 ntTSL 3 BASIC22.59■■□□□ 1.21
ATP6V1AP38606 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC22.59■■□□□ 1.21
ATP6V1AP38606 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC22.59■■□□□ 1.21
ATP6V1AP38606 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC22.59■■□□□ 1.21
ATP6V1AP38606 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
ATP6V1AP38606 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
ATP6V1AP38606 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC22.59■■□□□ 1.21
ATP6V1AP38606 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
ATP6V1AP38606 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
ATP6V1AP38606 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
ATP6V1AP38606 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
ATP6V1AP38606 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
ATP6V1AP38606 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
ATP6V1AP38606 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC22.59■■□□□ 1.21
ATP6V1AP38606 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
ATP6V1AP38606 BCAR1-209ENST00000546196 1340 ntBASIC22.58■■□□□ 1.21
ATP6V1AP38606 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
ATP6V1AP38606 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
ATP6V1AP38606 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC22.58■■□□□ 1.21
ATP6V1AP38606 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
ATP6V1AP38606 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
ATP6V1AP38606 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC22.58■■□□□ 1.21
ATP6V1AP38606 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms