Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHC1P29353 PCDHA12-202ENST00000613593 2588 ntBASIC16.37■□□□□ 0.21
SHC1P29353 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SHC1P29353 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHC1P29353 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHC1P29353 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHC1P29353 OR6D1P-202ENST00000641007 5290 ntBASIC16.37■□□□□ 0.21
SHC1P29353 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.37■□□□□ 0.21
SHC1P29353 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHC1P29353 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
SHC1P29353 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.37■□□□□ 0.21
SHC1P29353 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SHC1P29353 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SHC1P29353 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHC1P29353 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.37■□□□□ 0.21
SHC1P29353 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SHC1P29353 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHC1P29353 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SHC1P29353 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SHC1P29353 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.37■□□□□ 0.21
SHC1P29353 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.37■□□□□ 0.21
SHC1P29353 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.37■□□□□ 0.21
SHC1P29353 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.37■□□□□ 0.21
SHC1P29353 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.37■□□□□ 0.21
SHC1P29353 AC004263.2-201ENST00000617183 678 ntBASIC16.37■□□□□ 0.21
SHC1P29353 AC116407.4-201ENST00000623319 1061 ntBASIC16.37■□□□□ 0.21
SHC1P29353 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
SHC1P29353 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHC1P29353 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SHC1P29353 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
SHC1P29353 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SHC1P29353 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.37■□□□□ 0.21
SHC1P29353 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SHC1P29353 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SHC1P29353 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.37■□□□□ 0.21
SHC1P29353 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SHC1P29353 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.37■□□□□ 0.21
SHC1P29353 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SHC1P29353 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.36■□□□□ 0.21
SHC1P29353 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHC1P29353 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.36■□□□□ 0.21
SHC1P29353 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHC1P29353 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
SHC1P29353 REXO1L9P-201ENST00000604264 2108 ntBASIC16.36■□□□□ 0.21
SHC1P29353 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHC1P29353 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SHC1P29353 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.36■□□□□ 0.21
SHC1P29353 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SHC1P29353 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHC1P29353 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHC1P29353 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SHC1P29353 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHC1P29353 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.36■□□□□ 0.21
SHC1P29353 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
SHC1P29353 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHC1P29353 IGHGP-201ENST00000390555 1178 ntBASIC16.36■□□□□ 0.21
SHC1P29353 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.36■□□□□ 0.21
SHC1P29353 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.36■□□□□ 0.21
SHC1P29353 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.36■□□□□ 0.21
SHC1P29353 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.36■□□□□ 0.21
SHC1P29353 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.36■□□□□ 0.21
SHC1P29353 AC005332.3-201ENST00000589904 676 ntBASIC16.36■□□□□ 0.21
SHC1P29353 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SHC1P29353 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.36■□□□□ 0.21
SHC1P29353 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
SHC1P29353 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHC1P29353 Z83836.1-201ENST00000624605 1642 ntBASIC16.36■□□□□ 0.21
SHC1P29353 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SHC1P29353 AL096828.2-201ENST00000567259 1965 ntBASIC16.36■□□□□ 0.21
SHC1P29353 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.36■□□□□ 0.21
SHC1P29353 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SHC1P29353 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SHC1P29353 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.36■□□□□ 0.21
SHC1P29353 IER3-202ENST00000376377 1350 ntBASIC16.36■□□□□ 0.21
SHC1P29353 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHC1P29353 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHC1P29353 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
SHC1P29353 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHC1P29353 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.35■□□□□ 0.21
SHC1P29353 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHC1P29353 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SHC1P29353 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHC1P29353 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHC1P29353 AC012317.2-201ENST00000623305 2251 ntBASIC16.35■□□□□ 0.21
SHC1P29353 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHC1P29353 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHC1P29353 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHC1P29353 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.35■□□□□ 0.21
SHC1P29353 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.35■□□□□ 0.21
SHC1P29353 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SHC1P29353 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHC1P29353 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SHC1P29353 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHC1P29353 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHC1P29353 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.35■□□□□ 0.21
SHC1P29353 AC011498.5-201ENST00000592027 486 ntBASIC16.35■□□□□ 0.21
SHC1P29353 AL390719.2-201ENST00000606993 987 ntBASIC16.35■□□□□ 0.21
SHC1P29353 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.35■□□□□ 0.21
SHC1P29353 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHC1P29353 SIRPAP1-201ENST00000448467 1770 ntBASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms