Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN6P29350 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN6P29350 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN6P29350 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.95■□□□□ 0.3
PTPN6P29350 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN6P29350 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN6P29350 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN6P29350 AC022211.2-201ENST00000585075 2527 ntBASIC16.95■□□□□ 0.3
PTPN6P29350 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN6P29350 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.95■□□□□ 0.3
PTPN6P29350 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN6P29350 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.95■□□□□ 0.3
PTPN6P29350 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN6P29350 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.95■□□□□ 0.3
PTPN6P29350 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.95■□□□□ 0.3
PTPN6P29350 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN6P29350 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
PTPN6P29350 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
PTPN6P29350 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.95■□□□□ 0.3
PTPN6P29350 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.95■□□□□ 0.3
PTPN6P29350 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.95■□□□□ 0.3
PTPN6P29350 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.95■□□□□ 0.3
PTPN6P29350 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
PTPN6P29350 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.95■□□□□ 0.3
PTPN6P29350 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.95■□□□□ 0.3
PTPN6P29350 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN6P29350 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN6P29350 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.95■□□□□ 0.3
PTPN6P29350 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.95■□□□□ 0.3
PTPN6P29350 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN6P29350 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.95■□□□□ 0.3
PTPN6P29350 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.95■□□□□ 0.3
PTPN6P29350 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PTPN6P29350 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN6P29350 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.94■□□□□ 0.3
PTPN6P29350 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN6P29350 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN6P29350 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN6P29350 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PTPN6P29350 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PTPN6P29350 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN6P29350 CROCCP2-202ENST00000412962 2773 ntBASIC16.94■□□□□ 0.3
PTPN6P29350 AC099398.1-201ENST00000567919 2776 ntBASIC16.94■□□□□ 0.3
PTPN6P29350 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN6P29350 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN6P29350 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN6P29350 ARMC10P1-201ENST00000313754 855 ntBASIC16.94■□□□□ 0.3
PTPN6P29350 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.94■□□□□ 0.3
PTPN6P29350 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.94■□□□□ 0.3
PTPN6P29350 AL359075.1-203ENST00000462729 1002 ntBASIC16.94■□□□□ 0.3
PTPN6P29350 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.94■□□□□ 0.3
PTPN6P29350 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.94■□□□□ 0.3
PTPN6P29350 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.94■□□□□ 0.3
PTPN6P29350 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.94■□□□□ 0.3
PTPN6P29350 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.94■□□□□ 0.3
PTPN6P29350 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
PTPN6P29350 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PTPN6P29350 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.94■□□□□ 0.3
PTPN6P29350 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN6P29350 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
PTPN6P29350 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN6P29350 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN6P29350 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN6P29350 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN6P29350 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.94■□□□□ 0.3
PTPN6P29350 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
PTPN6P29350 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN6P29350 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN6P29350 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN6P29350 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN6P29350 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN6P29350 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
PTPN6P29350 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN6P29350 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.93■□□□□ 0.3
PTPN6P29350 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN6P29350 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN6P29350 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
PTPN6P29350 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PTPN6P29350 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PTPN6P29350 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.93■□□□□ 0.3
PTPN6P29350 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN6P29350 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN6P29350 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.93■□□□□ 0.3
PTPN6P29350 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN6P29350 STARP1-201ENST00000397973 869 ntBASIC16.93■□□□□ 0.3
PTPN6P29350 PVRIG2P-201ENST00000435460 978 ntBASIC16.93■□□□□ 0.3
PTPN6P29350 KRT18P38-201ENST00000449496 1282 ntBASIC16.93■□□□□ 0.3
PTPN6P29350 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.93■□□□□ 0.3
PTPN6P29350 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN6P29350 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.93■□□□□ 0.3
PTPN6P29350 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.93■□□□□ 0.3
PTPN6P29350 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PTPN6P29350 REXO1L11P-201ENST00000620964 1927 ntBASIC16.93■□□□□ 0.3
PTPN6P29350 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN6P29350 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PTPN6P29350 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.93■□□□□ 0.3
PTPN6P29350 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.93■□□□□ 0.3
PTPN6P29350 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.93■□□□□ 0.3
PTPN6P29350 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN6P29350 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms