Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.38■□□□□ 0.37
EPHA3P29320 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.38■□□□□ 0.37
EPHA3P29320 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.38■□□□□ 0.37
EPHA3P29320 AC018695.7-201ENST00000624587 2492 ntBASIC17.38■□□□□ 0.37
EPHA3P29320 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EPHA3P29320 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
EPHA3P29320 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.38■□□□□ 0.37
EPHA3P29320 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.38■□□□□ 0.37
EPHA3P29320 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.38■□□□□ 0.37
EPHA3P29320 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
EPHA3P29320 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
EPHA3P29320 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EPHA3P29320 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.38■□□□□ 0.37
EPHA3P29320 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
EPHA3P29320 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
EPHA3P29320 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EPHA3P29320 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.38■□□□□ 0.37
EPHA3P29320 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.38■□□□□ 0.37
EPHA3P29320 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.38■□□□□ 0.37
EPHA3P29320 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.38■□□□□ 0.37
EPHA3P29320 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
EPHA3P29320 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
EPHA3P29320 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.38■□□□□ 0.37
EPHA3P29320 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EPHA3P29320 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
EPHA3P29320 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EPHA3P29320 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.38■□□□□ 0.37
EPHA3P29320 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
EPHA3P29320 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EPHA3P29320 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
EPHA3P29320 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EPHA3P29320 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EPHA3P29320 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.38■□□□□ 0.37
EPHA3P29320 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EPHA3P29320 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.38■□□□□ 0.37
EPHA3P29320 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.37■□□□□ 0.37
EPHA3P29320 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
EPHA3P29320 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EPHA3P29320 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EPHA3P29320 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
EPHA3P29320 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
EPHA3P29320 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EPHA3P29320 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EPHA3P29320 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
EPHA3P29320 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
EPHA3P29320 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EPHA3P29320 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
EPHA3P29320 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
EPHA3P29320 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EPHA3P29320 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
EPHA3P29320 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.37■□□□□ 0.37
EPHA3P29320 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
EPHA3P29320 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EPHA3P29320 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.37■□□□□ 0.37
EPHA3P29320 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
EPHA3P29320 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
EPHA3P29320 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
EPHA3P29320 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.37■□□□□ 0.37
EPHA3P29320 AL355355.2-201ENST00000442321 338 ntBASIC17.37■□□□□ 0.37
EPHA3P29320 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.37■□□□□ 0.37
EPHA3P29320 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.37■□□□□ 0.37
EPHA3P29320 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.37■□□□□ 0.37
EPHA3P29320 UBALD1-205ENST00000590891 2641 ntBASIC17.37■□□□□ 0.37
EPHA3P29320 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EPHA3P29320 AC022898.2-201ENST00000616822 1312 ntBASIC17.37■□□□□ 0.37
EPHA3P29320 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
EPHA3P29320 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.37■□□□□ 0.37
EPHA3P29320 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EPHA3P29320 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
EPHA3P29320 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.37■□□□□ 0.37
EPHA3P29320 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
EPHA3P29320 AC092338.2-201ENST00000568827 1415 ntBASIC17.37■□□□□ 0.37
EPHA3P29320 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
EPHA3P29320 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EPHA3P29320 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EPHA3P29320 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
EPHA3P29320 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.37■□□□□ 0.37
EPHA3P29320 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHA3P29320 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHA3P29320 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHA3P29320 AL118508.1-201ENST00000613502 2345 ntBASIC17.36■□□□□ 0.37
EPHA3P29320 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
EPHA3P29320 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.36■□□□□ 0.37
EPHA3P29320 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHA3P29320 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
EPHA3P29320 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHA3P29320 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHA3P29320 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHA3P29320 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
EPHA3P29320 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.36■□□□□ 0.37
EPHA3P29320 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.36■□□□□ 0.37
EPHA3P29320 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.36■□□□□ 0.37
EPHA3P29320 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.36■□□□□ 0.37
EPHA3P29320 REXO1L11P-201ENST00000620964 1927 ntBASIC17.36■□□□□ 0.37
EPHA3P29320 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.36■□□□□ 0.37
EPHA3P29320 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
EPHA3P29320 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHA3P29320 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHA3P29320 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
EPHA3P29320 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms