Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 KRT8P47-201ENST00000604727 1398 ntBASIC16.18■□□□□ 0.18
GDF1P27539 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
GDF1P27539 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GDF1P27539 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GDF1P27539 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.18■□□□□ 0.18
GDF1P27539 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GDF1P27539 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.18■□□□□ 0.18
GDF1P27539 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.18■□□□□ 0.18
GDF1P27539 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.18■□□□□ 0.18
GDF1P27539 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.18■□□□□ 0.18
GDF1P27539 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.18■□□□□ 0.18
GDF1P27539 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GDF1P27539 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.18■□□□□ 0.18
GDF1P27539 AC011467.2-201ENST00000598425 242 ntBASIC16.18■□□□□ 0.18
GDF1P27539 AL031008.1-201ENST00000619963 541 ntBASIC16.18■□□□□ 0.18
GDF1P27539 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GDF1P27539 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.18■□□□□ 0.18
GDF1P27539 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
GDF1P27539 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GDF1P27539 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GDF1P27539 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GDF1P27539 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
GDF1P27539 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
GDF1P27539 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.18■□□□□ 0.18
GDF1P27539 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GDF1P27539 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.18■□□□□ 0.18
GDF1P27539 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
GDF1P27539 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GDF1P27539 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GDF1P27539 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
GDF1P27539 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GDF1P27539 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
GDF1P27539 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GDF1P27539 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.17■□□□□ 0.18
GDF1P27539 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
GDF1P27539 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
GDF1P27539 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GDF1P27539 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.17■□□□□ 0.18
GDF1P27539 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
GDF1P27539 AKR1C7P-201ENST00000305623 895 ntBASIC16.17■□□□□ 0.18
GDF1P27539 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.17■□□□□ 0.18
GDF1P27539 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.17■□□□□ 0.18
GDF1P27539 AC079781.3-201ENST00000449110 356 ntBASIC16.17■□□□□ 0.18
GDF1P27539 AC132008.2-207ENST00000454517 770 ntBASIC16.17■□□□□ 0.18
GDF1P27539 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.17■□□□□ 0.18
GDF1P27539 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.17■□□□□ 0.18
GDF1P27539 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.17■□□□□ 0.18
GDF1P27539 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.17■□□□□ 0.18
GDF1P27539 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GDF1P27539 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.17■□□□□ 0.18
GDF1P27539 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
GDF1P27539 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.17■□□□□ 0.18
GDF1P27539 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
GDF1P27539 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.17■□□□□ 0.18
GDF1P27539 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
GDF1P27539 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GDF1P27539 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
GDF1P27539 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.17■□□□□ 0.18
GDF1P27539 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.17■□□□□ 0.18
GDF1P27539 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.17■□□□□ 0.18
GDF1P27539 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GDF1P27539 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GDF1P27539 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
GDF1P27539 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.17■□□□□ 0.18
GDF1P27539 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
GDF1P27539 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
GDF1P27539 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
GDF1P27539 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GDF1P27539 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.16■□□□□ 0.18
GDF1P27539 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GDF1P27539 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.16■□□□□ 0.18
GDF1P27539 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GDF1P27539 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GDF1P27539 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
GDF1P27539 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.16■□□□□ 0.18
GDF1P27539 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
GDF1P27539 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.16■□□□□ 0.18
GDF1P27539 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
GDF1P27539 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GDF1P27539 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.16■□□□□ 0.18
GDF1P27539 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.16■□□□□ 0.18
GDF1P27539 INTS4P1-201ENST00000438455 1935 ntBASIC16.16■□□□□ 0.18
GDF1P27539 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GDF1P27539 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.16■□□□□ 0.18
GDF1P27539 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GDF1P27539 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.16■□□□□ 0.18
GDF1P27539 AC007967.3-201ENST00000434308 558 ntBASIC16.16■□□□□ 0.18
GDF1P27539 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
GDF1P27539 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.16■□□□□ 0.18
GDF1P27539 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.16■□□□□ 0.18
GDF1P27539 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.16■□□□□ 0.18
GDF1P27539 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.16■□□□□ 0.18
GDF1P27539 AL121912.1-201ENST00000603683 238 ntBASIC16.16■□□□□ 0.18
GDF1P27539 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
GDF1P27539 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GDF1P27539 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GDF1P27539 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
GDF1P27539 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.16■□□□□ 0.18
GDF1P27539 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.16■□□□□ 0.18
GDF1P27539 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms