Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.72■□□□□ 0.27
CHMP24386 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.72■□□□□ 0.27
CHMP24386 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.72■□□□□ 0.27
CHMP24386 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP24386 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP24386 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.72■□□□□ 0.27
CHMP24386 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP24386 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP24386 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.72■□□□□ 0.27
CHMP24386 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
CHMP24386 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
CHMP24386 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CHMP24386 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP24386 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
CHMP24386 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP24386 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CHMP24386 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.71■□□□□ 0.27
CHMP24386 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CHMP24386 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP24386 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP24386 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP24386 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
CHMP24386 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.71■□□□□ 0.27
CHMP24386 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CHMP24386 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.71■□□□□ 0.27
CHMP24386 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP24386 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.71■□□□□ 0.27
CHMP24386 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP24386 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP24386 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.71■□□□□ 0.27
CHMP24386 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.71■□□□□ 0.27
CHMP24386 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.71■□□□□ 0.27
CHMP24386 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
CHMP24386 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.71■□□□□ 0.27
CHMP24386 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.71■□□□□ 0.27
CHMP24386 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP24386 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
CHMP24386 HYMAI.1-201ENST00000620949 238 ntBASIC16.71■□□□□ 0.27
CHMP24386 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP24386 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP24386 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CHMP24386 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CHMP24386 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.71■□□□□ 0.27
CHMP24386 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.71■□□□□ 0.27
CHMP24386 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP24386 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.71■□□□□ 0.27
CHMP24386 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
CHMP24386 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP24386 LINC01311-201ENST00000565162 1445 ntBASIC16.7■□□□□ 0.26
CHMP24386 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP24386 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CHMP24386 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.7■□□□□ 0.26
CHMP24386 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.7■□□□□ 0.26
CHMP24386 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP24386 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.7■□□□□ 0.26
CHMP24386 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP24386 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CHMP24386 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP24386 AC106820.2-201ENST00000563775 3264 ntBASIC16.7■□□□□ 0.26
CHMP24386 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP24386 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP24386 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.7■□□□□ 0.26
CHMP24386 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP24386 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP24386 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP24386 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.7■□□□□ 0.26
CHMP24386 ZNF444P1-201ENST00000559497 298 ntBASIC16.7■□□□□ 0.26
CHMP24386 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.7■□□□□ 0.26
CHMP24386 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.7■□□□□ 0.26
CHMP24386 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP24386 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.7■□□□□ 0.26
CHMP24386 AL157888.1-201ENST00000631930 593 ntBASIC16.7■□□□□ 0.26
CHMP24386 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CHMP24386 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP24386 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CHMP24386 AC124067.4-201ENST00000519691 2379 ntBASIC16.7■□□□□ 0.26
CHMP24386 KRT8P50-201ENST00000562022 1438 ntBASIC16.7■□□□□ 0.26
CHMP24386 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CHMP24386 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP24386 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CHMP24386 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.69■□□□□ 0.26
CHMP24386 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.69■□□□□ 0.26
CHMP24386 AC099343.3-201ENST00000605834 2503 ntBASIC16.69■□□□□ 0.26
CHMP24386 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP24386 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CHMP24386 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP24386 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP24386 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.69■□□□□ 0.26
CHMP24386 HBZP1-201ENST00000354915 429 ntBASIC16.69■□□□□ 0.26
CHMP24386 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP24386 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP24386 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.69■□□□□ 0.26
CHMP24386 AL136038.3-201ENST00000561909 1096 ntBASIC16.69■□□□□ 0.26
CHMP24386 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP24386 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP24386 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CHMP24386 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.69■□□□□ 0.26
CHMP24386 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP24386 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP24386 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms