Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.6■□□□□ 0.89
ATP2B1P20020 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2B1P20020 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2B1P20020 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.6■□□□□ 0.89
ATP2B1P20020 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2B1P20020 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.6■□□□□ 0.89
ATP2B1P20020 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2B1P20020 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2B1P20020 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
ATP2B1P20020 AC106820.2-201ENST00000563775 3264 ntBASIC20.59■□□□□ 0.89
ATP2B1P20020 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
ATP2B1P20020 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2B1P20020 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.59■□□□□ 0.89
ATP2B1P20020 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2B1P20020 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2B1P20020 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.59■□□□□ 0.89
ATP2B1P20020 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2B1P20020 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
ATP2B1P20020 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.59■□□□□ 0.89
ATP2B1P20020 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2B1P20020 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2B1P20020 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2B1P20020 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
ATP2B1P20020 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
ATP2B1P20020 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ATP2B1P20020 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
ATP2B1P20020 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
ATP2B1P20020 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2B1P20020 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2B1P20020 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2B1P20020 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2B1P20020 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.59■□□□□ 0.89
ATP2B1P20020 MIR662-201ENST00000384847 95 ntBASIC20.59■□□□□ 0.89
ATP2B1P20020 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.59■□□□□ 0.89
ATP2B1P20020 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2B1P20020 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.59■□□□□ 0.89
ATP2B1P20020 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.59■□□□□ 0.89
ATP2B1P20020 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.59■□□□□ 0.89
ATP2B1P20020 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.59■□□□□ 0.89
ATP2B1P20020 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2B1P20020 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
ATP2B1P20020 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.59■□□□□ 0.89
ATP2B1P20020 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.59■□□□□ 0.89
ATP2B1P20020 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2B1P20020 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
ATP2B1P20020 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
ATP2B1P20020 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
ATP2B1P20020 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2B1P20020 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.58■□□□□ 0.89
ATP2B1P20020 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2B1P20020 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2B1P20020 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
ATP2B1P20020 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2B1P20020 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2B1P20020 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2B1P20020 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2B1P20020 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2B1P20020 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.58■□□□□ 0.89
ATP2B1P20020 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2B1P20020 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2B1P20020 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.58■□□□□ 0.89
ATP2B1P20020 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.58■□□□□ 0.89
ATP2B1P20020 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.58■□□□□ 0.89
ATP2B1P20020 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.58■□□□□ 0.89
ATP2B1P20020 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.58■□□□□ 0.89
ATP2B1P20020 RNF126P1-202ENST00000569893 925 ntBASIC20.58■□□□□ 0.89
ATP2B1P20020 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.58■□□□□ 0.89
ATP2B1P20020 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.58■□□□□ 0.89
ATP2B1P20020 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2B1P20020 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATP2B1P20020 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ATP2B1P20020 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC20.58■□□□□ 0.88
ATP2B1P20020 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATP2B1P20020 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATP2B1P20020 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ATP2B1P20020 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
ATP2B1P20020 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATP2B1P20020 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.58■□□□□ 0.88
ATP2B1P20020 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP2B1P20020 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATP2B1P20020 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP2B1P20020 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ATP2B1P20020 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.57■□□□□ 0.88
ATP2B1P20020 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP2B1P20020 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATP2B1P20020 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.57■□□□□ 0.88
ATP2B1P20020 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP2B1P20020 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ATP2B1P20020 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP2B1P20020 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATP2B1P20020 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATP2B1P20020 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.57■□□□□ 0.88
ATP2B1P20020 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.57■□□□□ 0.88
ATP2B1P20020 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.57■□□□□ 0.88
ATP2B1P20020 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.57■□□□□ 0.88
ATP2B1P20020 AC005332.3-201ENST00000589904 676 ntBASIC20.57■□□□□ 0.88
ATP2B1P20020 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.57■□□□□ 0.88
ATP2B1P20020 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.57■□□□□ 0.88
ATP2B1P20020 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP2B1P20020 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms