Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.78■□□□□ 0.28
CCL4P13236 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.78■□□□□ 0.28
CCL4P13236 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.78■□□□□ 0.28
CCL4P13236 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.78■□□□□ 0.28
CCL4P13236 AC002347.1-201ENST00000569543 541 ntBASIC16.78■□□□□ 0.28
CCL4P13236 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCL4P13236 AL589182.2-201ENST00000619332 1049 ntBASIC16.78■□□□□ 0.28
CCL4P13236 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.78■□□□□ 0.28
CCL4P13236 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CCL4P13236 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.78■□□□□ 0.28
CCL4P13236 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL4P13236 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.78■□□□□ 0.28
CCL4P13236 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL4P13236 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCL4P13236 AL353593.2-201ENST00000602529 1483 ntBASIC16.78■□□□□ 0.28
CCL4P13236 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCL4P13236 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.78■□□□□ 0.28
CCL4P13236 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.78■□□□□ 0.28
CCL4P13236 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL4P13236 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCL4P13236 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CCL4P13236 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL4P13236 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL4P13236 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL4P13236 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
CCL4P13236 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
CCL4P13236 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL4P13236 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.77■□□□□ 0.28
CCL4P13236 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL4P13236 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.77■□□□□ 0.28
CCL4P13236 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL4P13236 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.77■□□□□ 0.28
CCL4P13236 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCL4P13236 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCL4P13236 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL4P13236 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL4P13236 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL4P13236 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CCL4P13236 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CCL4P13236 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.77■□□□□ 0.28
CCL4P13236 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.77■□□□□ 0.28
CCL4P13236 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.77■□□□□ 0.28
CCL4P13236 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CCL4P13236 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.77■□□□□ 0.28
CCL4P13236 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.77■□□□□ 0.28
CCL4P13236 AP001160.2-201ENST00000596071 487 ntBASIC16.77■□□□□ 0.28
CCL4P13236 AC004706.3-202ENST00000621574 984 ntBASIC16.77■□□□□ 0.28
CCL4P13236 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.77■□□□□ 0.28
CCL4P13236 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL4P13236 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL4P13236 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL4P13236 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCL4P13236 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CCL4P13236 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCL4P13236 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.77■□□□□ 0.27
CCL4P13236 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
CCL4P13236 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCL4P13236 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.77■□□□□ 0.27
CCL4P13236 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.77■□□□□ 0.27
CCL4P13236 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.77■□□□□ 0.27
CCL4P13236 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCL4P13236 AC006504.4-201ENST00000592118 1568 ntBASIC16.77■□□□□ 0.27
CCL4P13236 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CCL4P13236 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL4P13236 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCL4P13236 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL4P13236 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CCL4P13236 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CCL4P13236 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCL4P13236 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL4P13236 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCL4P13236 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.76■□□□□ 0.27
CCL4P13236 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL4P13236 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CCL4P13236 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL4P13236 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CCL4P13236 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
CCL4P13236 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.76■□□□□ 0.27
CCL4P13236 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CCL4P13236 ELK2BP-201ENST00000415014 1224 ntBASIC16.76■□□□□ 0.27
CCL4P13236 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCL4P13236 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CCL4P13236 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.76■□□□□ 0.27
CCL4P13236 AC134684.3-201ENST00000641758 218 ntBASIC16.76■□□□□ 0.27
CCL4P13236 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.76■□□□□ 0.27
CCL4P13236 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CCL4P13236 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.76■□□□□ 0.27
CCL4P13236 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.76■□□□□ 0.27
CCL4P13236 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL4P13236 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CCL4P13236 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CCL4P13236 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL4P13236 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL4P13236 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL4P13236 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CCL4P13236 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.75■□□□□ 0.27
CCL4P13236 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.75■□□□□ 0.27
CCL4P13236 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL4P13236 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL4P13236 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms