Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBL4AP11441 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBL4AP11441 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBL4AP11441 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBL4AP11441 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBL4AP11441 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.55■□□□□ 0.24
UBL4AP11441 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.55■□□□□ 0.24
UBL4AP11441 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.55■□□□□ 0.24
UBL4AP11441 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.55■□□□□ 0.24
UBL4AP11441 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.55■□□□□ 0.24
UBL4AP11441 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
UBL4AP11441 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
UBL4AP11441 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.55■□□□□ 0.24
UBL4AP11441 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
UBL4AP11441 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBL4AP11441 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBL4AP11441 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.55■□□□□ 0.24
UBL4AP11441 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBL4AP11441 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBL4AP11441 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBL4AP11441 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBL4AP11441 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
UBL4AP11441 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
UBL4AP11441 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
UBL4AP11441 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.55■□□□□ 0.24
UBL4AP11441 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.55■□□□□ 0.24
UBL4AP11441 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
UBL4AP11441 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
UBL4AP11441 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.54■□□□□ 0.24
UBL4AP11441 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBL4AP11441 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.54■□□□□ 0.24
UBL4AP11441 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.54■□□□□ 0.24
UBL4AP11441 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.54■□□□□ 0.24
UBL4AP11441 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UBL4AP11441 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
UBL4AP11441 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UBL4AP11441 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
UBL4AP11441 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBL4AP11441 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBL4AP11441 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBL4AP11441 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBL4AP11441 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBL4AP11441 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBL4AP11441 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.54■□□□□ 0.24
UBL4AP11441 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.54■□□□□ 0.24
UBL4AP11441 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.54■□□□□ 0.24
UBL4AP11441 AL671277.2-201ENST00000458060 996 ntBASIC16.54■□□□□ 0.24
UBL4AP11441 AP003733.1-201ENST00000491725 852 ntBASIC16.54■□□□□ 0.24
UBL4AP11441 DUTP2-201ENST00000519164 463 ntBASIC16.54■□□□□ 0.24
UBL4AP11441 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.54■□□□□ 0.24
UBL4AP11441 HYMAI.1-201ENST00000620949 238 ntBASIC16.54■□□□□ 0.24
UBL4AP11441 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBL4AP11441 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
UBL4AP11441 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UBL4AP11441 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBL4AP11441 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBL4AP11441 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UBL4AP11441 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UBL4AP11441 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.54■□□□□ 0.24
UBL4AP11441 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBL4AP11441 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.54■□□□□ 0.24
UBL4AP11441 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.54■□□□□ 0.24
UBL4AP11441 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
UBL4AP11441 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
UBL4AP11441 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBL4AP11441 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
UBL4AP11441 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UBL4AP11441 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.53■□□□□ 0.24
UBL4AP11441 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBL4AP11441 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBL4AP11441 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
UBL4AP11441 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBL4AP11441 AC022898.2-201ENST00000616822 1312 ntBASIC16.53■□□□□ 0.24
UBL4AP11441 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
UBL4AP11441 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UBL4AP11441 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.53■□□□□ 0.24
UBL4AP11441 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBL4AP11441 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBL4AP11441 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UBL4AP11441 MIR662-201ENST00000384847 95 ntBASIC16.53■□□□□ 0.24
UBL4AP11441 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.53■□□□□ 0.24
UBL4AP11441 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UBL4AP11441 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.53■□□□□ 0.24
UBL4AP11441 VENTXP5-201ENST00000523979 775 ntBASIC16.53■□□□□ 0.24
UBL4AP11441 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UBL4AP11441 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.53■□□□□ 0.24
UBL4AP11441 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.53■□□□□ 0.24
UBL4AP11441 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBL4AP11441 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBL4AP11441 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
UBL4AP11441 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBL4AP11441 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBL4AP11441 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBL4AP11441 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBL4AP11441 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.53■□□□□ 0.24
UBL4AP11441 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.53■□□□□ 0.24
UBL4AP11441 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
UBL4AP11441 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UBL4AP11441 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.53■□□□□ 0.24
UBL4AP11441 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms