Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CD28P10747 AL049840.3-201ENST00000602669 611 ntBASIC13.96□□□□□ -0.17
CD28P10747 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
CD28P10747 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC13.96□□□□□ -0.17
CD28P10747 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CD28P10747 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CD28P10747 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CD28P10747 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CD28P10747 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC13.96□□□□□ -0.18
CD28P10747 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CD28P10747 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CD28P10747 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CD28P10747 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
CD28P10747 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC13.96□□□□□ -0.18
CD28P10747 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CD28P10747 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CD28P10747 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
CD28P10747 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC13.95□□□□□ -0.18
CD28P10747 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC13.95□□□□□ -0.18
CD28P10747 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD28P10747 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD28P10747 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC13.95□□□□□ -0.18
CD28P10747 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD28P10747 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD28P10747 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD28P10747 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD28P10747 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD28P10747 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD28P10747 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CD28P10747 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CD28P10747 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CD28P10747 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD28P10747 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD28P10747 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD28P10747 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD28P10747 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
CD28P10747 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CD28P10747 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC13.95□□□□□ -0.18
CD28P10747 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC13.95□□□□□ -0.18
CD28P10747 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD28P10747 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC13.95□□□□□ -0.18
CD28P10747 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CD28P10747 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.95□□□□□ -0.18
CD28P10747 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.95□□□□□ -0.18
CD28P10747 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC13.95□□□□□ -0.18
CD28P10747 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CD28P10747 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CD28P10747 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13.95□□□□□ -0.18
CD28P10747 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CD28P10747 AL671883.3-201ENST00000603274 991 ntBASIC13.95□□□□□ -0.18
CD28P10747 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD28P10747 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CD28P10747 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CD28P10747 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CD28P10747 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD28P10747 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC13.95□□□□□ -0.18
CD28P10747 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC13.95□□□□□ -0.18
CD28P10747 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
CD28P10747 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD28P10747 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC13.95□□□□□ -0.18
CD28P10747 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD28P10747 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD28P10747 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD28P10747 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC13.95□□□□□ -0.18
CD28P10747 AC243591.1-201ENST00000452967 1364 ntBASIC13.95□□□□□ -0.18
CD28P10747 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC13.95□□□□□ -0.18
CD28P10747 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC13.95□□□□□ -0.18
CD28P10747 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD28P10747 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC13.94□□□□□ -0.18
CD28P10747 AC126763.1-201ENST00000552015 2118 ntBASIC13.94□□□□□ -0.18
CD28P10747 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD28P10747 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD28P10747 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CD28P10747 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
CD28P10747 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC13.94□□□□□ -0.18
CD28P10747 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD28P10747 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC13.94□□□□□ -0.18
CD28P10747 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD28P10747 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD28P10747 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD28P10747 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD28P10747 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD28P10747 KIRREL3-AS3-201ENST00000404882 831 ntBASIC13.94□□□□□ -0.18
CD28P10747 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD28P10747 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD28P10747 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.94□□□□□ -0.18
CD28P10747 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.94□□□□□ -0.18
CD28P10747 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC13.94□□□□□ -0.18
CD28P10747 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD28P10747 AC018712.1-201ENST00000455767 687 ntBASIC13.94□□□□□ -0.18
CD28P10747 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC13.94□□□□□ -0.18
CD28P10747 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CD28P10747 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.94□□□□□ -0.18
CD28P10747 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC13.94□□□□□ -0.18
CD28P10747 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC13.94□□□□□ -0.18
CD28P10747 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CD28P10747 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD28P10747 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD28P10747 CROCCP1-201ENST00000426910 5675 ntBASIC13.94□□□□□ -0.18
CD28P10747 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms