Protein–RNA interactions for Protein: P0C0L4

C4A, Complement C4-A, humanhuman

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4AP0C0L4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
C4AP0C0L4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
C4AP0C0L4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
C4AP0C0L4 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
C4AP0C0L4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
C4AP0C0L4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC22.27■■□□□ 1.16
C4AP0C0L4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
C4AP0C0L4 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
C4AP0C0L4 OR7E47P-204ENST00000575924 449 ntBASIC22.27■■□□□ 1.16
C4AP0C0L4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC22.27■■□□□ 1.16
C4AP0C0L4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC22.27■■□□□ 1.16
C4AP0C0L4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC22.27■■□□□ 1.16
C4AP0C0L4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
C4AP0C0L4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
C4AP0C0L4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
C4AP0C0L4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC22.27■■□□□ 1.16
C4AP0C0L4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
C4AP0C0L4 CROCCP3-202ENST00000420820 1947 ntBASIC22.26■■□□□ 1.15
C4AP0C0L4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC22.26■■□□□ 1.15
C4AP0C0L4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
C4AP0C0L4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC22.26■■□□□ 1.15
C4AP0C0L4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC22.26■■□□□ 1.15
C4AP0C0L4 AC092902.6-201ENST00000641783 218 ntBASIC22.26■■□□□ 1.15
C4AP0C0L4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
C4AP0C0L4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
C4AP0C0L4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
C4AP0C0L4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC22.26■■□□□ 1.15
C4AP0C0L4 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC22.26■■□□□ 1.15
C4AP0C0L4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC22.26■■□□□ 1.15
C4AP0C0L4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
C4AP0C0L4 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC22.26■■□□□ 1.15
C4AP0C0L4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC22.26■■□□□ 1.15
C4AP0C0L4 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
C4AP0C0L4 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
C4AP0C0L4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC22.26■■□□□ 1.15
C4AP0C0L4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC22.26■■□□□ 1.15
C4AP0C0L4 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
C4AP0C0L4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC22.25■■□□□ 1.15
C4AP0C0L4 AC126763.1-201ENST00000552015 2118 ntBASIC22.25■■□□□ 1.15
C4AP0C0L4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC22.25■■□□□ 1.15
C4AP0C0L4 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
C4AP0C0L4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
C4AP0C0L4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
C4AP0C0L4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
C4AP0C0L4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
C4AP0C0L4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
C4AP0C0L4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
C4AP0C0L4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC22.25■■□□□ 1.15
C4AP0C0L4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC22.25■■□□□ 1.15
C4AP0C0L4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC22.25■■□□□ 1.15
C4AP0C0L4 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
C4AP0C0L4 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC22.25■■□□□ 1.15
C4AP0C0L4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC22.25■■□□□ 1.15
C4AP0C0L4 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC22.25■■□□□ 1.15
C4AP0C0L4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC22.25■■□□□ 1.15
C4AP0C0L4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
C4AP0C0L4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC22.25■■□□□ 1.15
C4AP0C0L4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
C4AP0C0L4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC22.24■■□□□ 1.15
C4AP0C0L4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
C4AP0C0L4 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
C4AP0C0L4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
C4AP0C0L4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
C4AP0C0L4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC22.24■■□□□ 1.15
C4AP0C0L4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
C4AP0C0L4 AP002414.1-201ENST00000391405 1147 ntBASIC22.24■■□□□ 1.15
C4AP0C0L4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC22.24■■□□□ 1.15
C4AP0C0L4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
C4AP0C0L4 AC023141.5-201ENST00000458585 616 ntBASIC22.24■■□□□ 1.15
C4AP0C0L4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
C4AP0C0L4 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC22.24■■□□□ 1.15
C4AP0C0L4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
C4AP0C0L4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
C4AP0C0L4 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC22.24■■□□□ 1.15
C4AP0C0L4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
C4AP0C0L4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
C4AP0C0L4 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
C4AP0C0L4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
C4AP0C0L4 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
C4AP0C0L4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
C4AP0C0L4 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
C4AP0C0L4 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC22.23■■□□□ 1.15
C4AP0C0L4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC22.23■■□□□ 1.15
C4AP0C0L4 AC022145.2-201ENST00000598203 171 ntBASIC22.23■■□□□ 1.15
C4AP0C0L4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
C4AP0C0L4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
C4AP0C0L4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC22.23■■□□□ 1.15
C4AP0C0L4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC22.23■■□□□ 1.15
C4AP0C0L4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
C4AP0C0L4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC22.23■■□□□ 1.15
C4AP0C0L4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC22.23■■□□□ 1.15
C4AP0C0L4 AC109322.1-201ENST00000524499 1264 ntBASIC22.23■■□□□ 1.15
C4AP0C0L4 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC22.23■■□□□ 1.15
C4AP0C0L4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC22.23■■□□□ 1.15
C4AP0C0L4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC22.22■■□□□ 1.15
C4AP0C0L4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC22.22■■□□□ 1.15
C4AP0C0L4 BCAR1-209ENST00000546196 1340 ntBASIC22.22■■□□□ 1.15
C4AP0C0L4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
C4AP0C0L4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
C4AP0C0L4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms