Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CAPN1P07384 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CAPN1P07384 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CAPN1P07384 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CAPN1P07384 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CAPN1P07384 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CAPN1P07384 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CAPN1P07384 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
CAPN1P07384 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CAPN1P07384 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CAPN1P07384 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
CAPN1P07384 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
CAPN1P07384 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CAPN1P07384 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CAPN1P07384 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CAPN1P07384 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.6■□□□□ 0.41
CAPN1P07384 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.6■□□□□ 0.41
CAPN1P07384 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.6■□□□□ 0.41
CAPN1P07384 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.6■□□□□ 0.41
CAPN1P07384 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.6■□□□□ 0.41
CAPN1P07384 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.6■□□□□ 0.41
CAPN1P07384 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CAPN1P07384 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CAPN1P07384 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CAPN1P07384 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CAPN1P07384 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.6■□□□□ 0.41
CAPN1P07384 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.6■□□□□ 0.41
CAPN1P07384 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CAPN1P07384 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CAPN1P07384 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CAPN1P07384 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.6■□□□□ 0.41
CAPN1P07384 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CAPN1P07384 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CAPN1P07384 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CAPN1P07384 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CAPN1P07384 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CAPN1P07384 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CAPN1P07384 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CAPN1P07384 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.59■□□□□ 0.41
CAPN1P07384 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CAPN1P07384 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.59■□□□□ 0.41
CAPN1P07384 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CAPN1P07384 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CAPN1P07384 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CAPN1P07384 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CAPN1P07384 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CAPN1P07384 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CAPN1P07384 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CAPN1P07384 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CAPN1P07384 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CAPN1P07384 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CAPN1P07384 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.59■□□□□ 0.41
CAPN1P07384 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.59■□□□□ 0.41
CAPN1P07384 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CAPN1P07384 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.59■□□□□ 0.41
CAPN1P07384 AL157888.1-201ENST00000631930 593 ntBASIC17.59■□□□□ 0.41
CAPN1P07384 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CAPN1P07384 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CAPN1P07384 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CAPN1P07384 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CAPN1P07384 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CAPN1P07384 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CAPN1P07384 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CAPN1P07384 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.59■□□□□ 0.41
CAPN1P07384 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CAPN1P07384 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CAPN1P07384 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CAPN1P07384 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CAPN1P07384 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.58■□□□□ 0.41
CAPN1P07384 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CAPN1P07384 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CAPN1P07384 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.58■□□□□ 0.41
CAPN1P07384 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CAPN1P07384 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CAPN1P07384 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CAPN1P07384 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.58■□□□□ 0.4
CAPN1P07384 AL645929.1-201ENST00000420084 975 ntBASIC17.58■□□□□ 0.4
CAPN1P07384 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CAPN1P07384 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.58■□□□□ 0.4
CAPN1P07384 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.58■□□□□ 0.4
CAPN1P07384 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.58■□□□□ 0.4
CAPN1P07384 MIR3917-201ENST00000580971 93 ntBASIC17.58■□□□□ 0.4
CAPN1P07384 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.58■□□□□ 0.4
CAPN1P07384 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CAPN1P07384 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CAPN1P07384 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
CAPN1P07384 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CAPN1P07384 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CAPN1P07384 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CAPN1P07384 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.58■□□□□ 0.4
CAPN1P07384 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CAPN1P07384 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CAPN1P07384 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CAPN1P07384 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CAPN1P07384 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CAPN1P07384 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CAPN1P07384 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CAPN1P07384 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CAPN1P07384 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.57■□□□□ 0.4
CAPN1P07384 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms