Protein–RNA interactions for Protein: P04433

IGKV3-11, Immunoglobulin kappa variable 3-11, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3-11P04433 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
IGKV3-11P04433 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
IGKV3-11P04433 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IGKV3-11P04433 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IGKV3-11P04433 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IGKV3-11P04433 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IGKV3-11P04433 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.45■□□□□ 0.22
IGKV3-11P04433 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
IGKV3-11P04433 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
IGKV3-11P04433 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.45■□□□□ 0.22
IGKV3-11P04433 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.45■□□□□ 0.22
IGKV3-11P04433 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
IGKV3-11P04433 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
IGKV3-11P04433 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.45■□□□□ 0.22
IGKV3-11P04433 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
IGKV3-11P04433 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.45■□□□□ 0.22
IGKV3-11P04433 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
IGKV3-11P04433 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.45■□□□□ 0.22
IGKV3-11P04433 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.45■□□□□ 0.22
IGKV3-11P04433 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.45■□□□□ 0.22
IGKV3-11P04433 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
IGKV3-11P04433 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
IGKV3-11P04433 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.45■□□□□ 0.22
IGKV3-11P04433 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.45■□□□□ 0.22
IGKV3-11P04433 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IGKV3-11P04433 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
IGKV3-11P04433 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.45■□□□□ 0.22
IGKV3-11P04433 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
IGKV3-11P04433 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.45■□□□□ 0.22
IGKV3-11P04433 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
IGKV3-11P04433 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.45■□□□□ 0.22
IGKV3-11P04433 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IGKV3-11P04433 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
IGKV3-11P04433 AC012317.2-201ENST00000623305 2251 ntBASIC16.45■□□□□ 0.22
IGKV3-11P04433 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
IGKV3-11P04433 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.45■□□□□ 0.22
IGKV3-11P04433 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
IGKV3-11P04433 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
IGKV3-11P04433 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.45■□□□□ 0.22
IGKV3-11P04433 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.45■□□□□ 0.22
IGKV3-11P04433 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
IGKV3-11P04433 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IGKV3-11P04433 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IGKV3-11P04433 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.44■□□□□ 0.22
IGKV3-11P04433 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
IGKV3-11P04433 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
IGKV3-11P04433 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.44■□□□□ 0.22
IGKV3-11P04433 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.44■□□□□ 0.22
IGKV3-11P04433 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
IGKV3-11P04433 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IGKV3-11P04433 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IGKV3-11P04433 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.44■□□□□ 0.22
IGKV3-11P04433 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
IGKV3-11P04433 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IGKV3-11P04433 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IGKV3-11P04433 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
IGKV3-11P04433 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IGKV3-11P04433 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IGKV3-11P04433 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
IGKV3-11P04433 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IGKV3-11P04433 AL450487.1-201ENST00000426799 995 ntBASIC16.44■□□□□ 0.22
IGKV3-11P04433 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IGKV3-11P04433 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.44■□□□□ 0.22
IGKV3-11P04433 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.44■□□□□ 0.22
IGKV3-11P04433 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IGKV3-11P04433 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.44■□□□□ 0.22
IGKV3-11P04433 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.44■□□□□ 0.22
IGKV3-11P04433 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.44■□□□□ 0.22
IGKV3-11P04433 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.44■□□□□ 0.22
IGKV3-11P04433 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IGKV3-11P04433 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.44■□□□□ 0.22
IGKV3-11P04433 AL591684.3-201ENST00000605187 298 ntBASIC16.44■□□□□ 0.22
IGKV3-11P04433 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.44■□□□□ 0.22
IGKV3-11P04433 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
IGKV3-11P04433 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.44■□□□□ 0.22
IGKV3-11P04433 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IGKV3-11P04433 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
IGKV3-11P04433 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.44■□□□□ 0.22
IGKV3-11P04433 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
IGKV3-11P04433 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IGKV3-11P04433 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.44■□□□□ 0.22
IGKV3-11P04433 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IGKV3-11P04433 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
IGKV3-11P04433 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
IGKV3-11P04433 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
IGKV3-11P04433 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
IGKV3-11P04433 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
IGKV3-11P04433 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
IGKV3-11P04433 RNF165-205ENST00000588679 2904 ntBASIC16.43■□□□□ 0.22
IGKV3-11P04433 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
IGKV3-11P04433 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IGKV3-11P04433 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IGKV3-11P04433 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IGKV3-11P04433 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.43■□□□□ 0.22
IGKV3-11P04433 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.43■□□□□ 0.22
IGKV3-11P04433 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.43■□□□□ 0.22
IGKV3-11P04433 UNC93B7-201ENST00000509439 705 ntBASIC16.43■□□□□ 0.22
IGKV3-11P04433 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.43■□□□□ 0.22
IGKV3-11P04433 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.43■□□□□ 0.22
IGKV3-11P04433 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms