Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD3DP04234 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.17■□□□□ 0.02
CD3DP04234 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD3DP04234 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD3DP04234 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD3DP04234 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD3DP04234 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD3DP04234 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD3DP04234 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CD3DP04234 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.17■□□□□ 0.02
CD3DP04234 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CD3DP04234 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CD3DP04234 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.16■□□□□ 0.02
CD3DP04234 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD3DP04234 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
CD3DP04234 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
CD3DP04234 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD3DP04234 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CD3DP04234 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD3DP04234 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD3DP04234 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.16■□□□□ 0.02
CD3DP04234 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CD3DP04234 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD3DP04234 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CD3DP04234 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD3DP04234 FLJ38576-201ENST00000623820 2459 ntBASIC15.16■□□□□ 0.02
CD3DP04234 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD3DP04234 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CD3DP04234 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD3DP04234 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CD3DP04234 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC15.16■□□□□ 0.02
CD3DP04234 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD3DP04234 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CD3DP04234 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC15.16■□□□□ 0.02
CD3DP04234 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD3DP04234 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC15.16■□□□□ 0.02
CD3DP04234 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC15.16■□□□□ 0.02
CD3DP04234 AC233263.1-201ENST00000578059 224 ntBASIC15.16■□□□□ 0.02
CD3DP04234 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC15.16■□□□□ 0.02
CD3DP04234 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC15.16■□□□□ 0.02
CD3DP04234 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CD3DP04234 AC133041.1-202ENST00000642053 222 ntBASIC15.16■□□□□ 0.02
CD3DP04234 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD3DP04234 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD3DP04234 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.16■□□□□ 0.02
CD3DP04234 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
CD3DP04234 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD3DP04234 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD3DP04234 AL162727.3-201ENST00000635661 2787 ntBASIC15.16■□□□□ 0.02
CD3DP04234 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD3DP04234 AL024508.2-201ENST00000607749 1894 ntBASIC15.16■□□□□ 0.02
CD3DP04234 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD3DP04234 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15.16■□□□□ 0.02
CD3DP04234 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD3DP04234 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD3DP04234 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CD3DP04234 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CD3DP04234 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.16■□□□□ 0.02
CD3DP04234 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD3DP04234 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.16■□□□□ 0.02
CD3DP04234 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CD3DP04234 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD3DP04234 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CD3DP04234 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD3DP04234 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD3DP04234 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CD3DP04234 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CD3DP04234 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CD3DP04234 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD3DP04234 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD3DP04234 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.15■□□□□ 0.02
CD3DP04234 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CD3DP04234 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD3DP04234 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CD3DP04234 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD3DP04234 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CD3DP04234 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CD3DP04234 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CD3DP04234 AC069152.1-201ENST00000438030 544 ntBASIC15.15■□□□□ 0.02
CD3DP04234 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
CD3DP04234 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC15.15■□□□□ 0.02
CD3DP04234 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD3DP04234 AC026271.3-201ENST00000571884 352 ntBASIC15.15■□□□□ 0.02
CD3DP04234 MIR3180-5-201ENST00000583743 153 ntBASIC15.15■□□□□ 0.02
CD3DP04234 AL353708.3-201ENST00000610272 989 ntBASIC15.15■□□□□ 0.02
CD3DP04234 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC15.15■□□□□ 0.02
CD3DP04234 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CD3DP04234 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
CD3DP04234 AL031985.4-201ENST00000642138 673 ntBASIC15.15■□□□□ 0.02
CD3DP04234 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD3DP04234 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CD3DP04234 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD3DP04234 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.15■□□□□ 0.02
CD3DP04234 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.15■□□□□ 0.02
CD3DP04234 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD3DP04234 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CD3DP04234 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CD3DP04234 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.15■□□□□ 0.02
CD3DP04234 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CD3DP04234 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms