Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
APOBP04114 ADM-207ENST00000530439 1839 ntTSL 2 BASIC11.03□□□□□ -0.64
APOBP04114 SPCS2P4-201ENST00000436160 681 ntBASIC11.03□□□□□ -0.64
APOBP04114 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC11.03□□□□□ -0.64
APOBP04114 TERF1P3-201ENST00000505638 1227 ntBASIC11.03□□□□□ -0.64
APOBP04114 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
APOBP04114 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
APOBP04114 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC11.03□□□□□ -0.64
APOBP04114 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC11.03□□□□□ -0.64
APOBP04114 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
APOBP04114 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
APOBP04114 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
APOBP04114 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
APOBP04114 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC11.03□□□□□ -0.64
APOBP04114 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC11.03□□□□□ -0.64
APOBP04114 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC11.03□□□□□ -0.64
APOBP04114 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
APOBP04114 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC11.03□□□□□ -0.64
APOBP04114 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC11.03□□□□□ -0.64
APOBP04114 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
APOBP04114 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
APOBP04114 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
APOBP04114 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
APOBP04114 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
APOBP04114 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
APOBP04114 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
APOBP04114 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC11.03□□□□□ -0.64
APOBP04114 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
APOBP04114 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
APOBP04114 WRB-204ENST00000398753 699 ntTSL 3 BASIC11.03□□□□□ -0.64
APOBP04114 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC11.03□□□□□ -0.64
APOBP04114 TIMM8BP1-201ENST00000452384 211 ntBASIC11.03□□□□□ -0.64
APOBP04114 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC11.03□□□□□ -0.64
APOBP04114 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
APOBP04114 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC11.03□□□□□ -0.64
APOBP04114 AC010336.2-201ENST00000564226 506 ntBASIC11.03□□□□□ -0.64
APOBP04114 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
APOBP04114 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
APOBP04114 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
APOBP04114 CYP51A1P2-201ENST00000419457 1499 ntBASIC11.03□□□□□ -0.64
APOBP04114 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
APOBP04114 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
APOBP04114 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
APOBP04114 LINC00982-205ENST00000420957 435 ntBASIC11.02□□□□□ -0.64
APOBP04114 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC11.02□□□□□ -0.64
APOBP04114 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
APOBP04114 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC11.02□□□□□ -0.64
APOBP04114 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC11.02□□□□□ -0.64
APOBP04114 ACTL9-202ENST00000612068 1252 ntBASIC11.02□□□□□ -0.64
APOBP04114 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC11.02□□□□□ -0.64
APOBP04114 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
APOBP04114 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC11.02□□□□□ -0.64
APOBP04114 AC008677.1-201ENST00000519230 1561 ntBASIC11.02□□□□□ -0.64
APOBP04114 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
APOBP04114 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
APOBP04114 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
APOBP04114 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
APOBP04114 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
APOBP04114 AL627223.1-201ENST00000416693 442 ntBASIC11.02□□□□□ -0.64
APOBP04114 FAM207CP-201ENST00000443486 507 ntBASIC11.02□□□□□ -0.64
APOBP04114 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC11.02□□□□□ -0.64
APOBP04114 MIR6799-201ENST00000620297 69 ntBASIC11.02□□□□□ -0.64
APOBP04114 GNAS-203ENST00000306120 1878 ntBASIC11.02□□□□□ -0.65
APOBP04114 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC11.02□□□□□ -0.65
APOBP04114 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC11.02□□□□□ -0.65
APOBP04114 GMCL1P1-201ENST00000463439 1581 ntBASIC11.02□□□□□ -0.65
APOBP04114 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
APOBP04114 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC11.02□□□□□ -0.65
APOBP04114 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
APOBP04114 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
APOBP04114 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
APOBP04114 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
APOBP04114 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
APOBP04114 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC11.02□□□□□ -0.65
APOBP04114 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC11.02□□□□□ -0.65
APOBP04114 SPDYE22P-201ENST00000582158 798 ntBASIC11.02□□□□□ -0.65
APOBP04114 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
APOBP04114 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
APOBP04114 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
APOBP04114 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
APOBP04114 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
APOBP04114 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
APOBP04114 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
APOBP04114 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
APOBP04114 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC11.02□□□□□ -0.65
APOBP04114 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
APOBP04114 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
APOBP04114 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC11.02□□□□□ -0.65
APOBP04114 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
APOBP04114 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
APOBP04114 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
APOBP04114 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC11.01□□□□□ -0.65
APOBP04114 FUT8-AS1-201ENST00000621019 1521 ntBASIC11.01□□□□□ -0.65
APOBP04114 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
APOBP04114 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
APOBP04114 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC11.01□□□□□ -0.65
APOBP04114 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC11.01□□□□□ -0.65
APOBP04114 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
APOBP04114 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
APOBP04114 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms