Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
VTNP04004 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
VTNP04004 RPL13AP23-201ENST00000480739 586 ntBASIC19.51■□□□□ 0.71
VTNP04004 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.51■□□□□ 0.71
VTNP04004 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VTNP04004 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.51■□□□□ 0.71
VTNP04004 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.51■□□□□ 0.71
VTNP04004 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.51■□□□□ 0.71
VTNP04004 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
VTNP04004 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
VTNP04004 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VTNP04004 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VTNP04004 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
VTNP04004 AC009949.1-201ENST00000623048 1830 ntBASIC19.51■□□□□ 0.71
VTNP04004 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VTNP04004 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.51■□□□□ 0.71
VTNP04004 AC079776.2-201ENST00000641154 1609 ntBASIC19.51■□□□□ 0.71
VTNP04004 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
VTNP04004 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
VTNP04004 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
VTNP04004 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
VTNP04004 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VTNP04004 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VTNP04004 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
VTNP04004 AC092910.1-201ENST00000482027 1129 ntBASIC19.5■□□□□ 0.71
VTNP04004 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
VTNP04004 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
VTNP04004 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.5■□□□□ 0.71
VTNP04004 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.5■□□□□ 0.71
VTNP04004 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VTNP04004 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
VTNP04004 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
VTNP04004 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
VTNP04004 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.5■□□□□ 0.71
VTNP04004 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
VTNP04004 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VTNP04004 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
VTNP04004 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VTNP04004 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VTNP04004 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VTNP04004 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.49■□□□□ 0.71
VTNP04004 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VTNP04004 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.49■□□□□ 0.71
VTNP04004 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VTNP04004 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VTNP04004 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VTNP04004 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.49■□□□□ 0.71
VTNP04004 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.49■□□□□ 0.71
VTNP04004 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VTNP04004 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VTNP04004 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
VTNP04004 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
VTNP04004 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.49■□□□□ 0.71
VTNP04004 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VTNP04004 AC106730.1-201ENST00000566722 1090 ntBASIC19.49■□□□□ 0.71
VTNP04004 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VTNP04004 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VTNP04004 AC023511.2-201ENST00000618803 211 ntBASIC19.49■□□□□ 0.71
VTNP04004 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.49■□□□□ 0.71
VTNP04004 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
VTNP04004 AL020996.1-203ENST00000536896 2307 ntBASIC19.49■□□□□ 0.71
VTNP04004 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VTNP04004 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VTNP04004 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
VTNP04004 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VTNP04004 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VTNP04004 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.49■□□□□ 0.71
VTNP04004 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
VTNP04004 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VTNP04004 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VTNP04004 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
VTNP04004 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VTNP04004 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VTNP04004 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.48■□□□□ 0.71
VTNP04004 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
VTNP04004 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VTNP04004 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VTNP04004 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
VTNP04004 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.48■□□□□ 0.71
VTNP04004 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VTNP04004 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VTNP04004 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
VTNP04004 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.48■□□□□ 0.71
VTNP04004 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.48■□□□□ 0.71
VTNP04004 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
VTNP04004 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VTNP04004 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
VTNP04004 HLA-J-201ENST00000462773 1622 ntBASIC19.48■□□□□ 0.71
VTNP04004 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.48■□□□□ 0.71
VTNP04004 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VTNP04004 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
VTNP04004 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
VTNP04004 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.48■□□□□ 0.71
VTNP04004 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.48■□□□□ 0.71
VTNP04004 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VTNP04004 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VTNP04004 PMS2P1-201ENST00000431037 1228 ntBASIC19.48■□□□□ 0.71
VTNP04004 AC103564.2-201ENST00000432853 1299 ntBASIC19.48■□□□□ 0.71
VTNP04004 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.48■□□□□ 0.71
VTNP04004 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms