Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
APOC1P02654 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.82■□□□□ 0.12
APOC1P02654 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.82■□□□□ 0.12
APOC1P02654 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
APOC1P02654 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
APOC1P02654 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APOC1P02654 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.82■□□□□ 0.12
APOC1P02654 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.82■□□□□ 0.12
APOC1P02654 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
APOC1P02654 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
APOC1P02654 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.81■□□□□ 0.12
APOC1P02654 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
APOC1P02654 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
APOC1P02654 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APOC1P02654 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APOC1P02654 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APOC1P02654 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.81■□□□□ 0.12
APOC1P02654 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC15.81■□□□□ 0.12
APOC1P02654 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
APOC1P02654 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
APOC1P02654 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
APOC1P02654 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.81■□□□□ 0.12
APOC1P02654 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
APOC1P02654 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APOC1P02654 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
APOC1P02654 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
APOC1P02654 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
APOC1P02654 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
APOC1P02654 TSPY15P-201ENST00000457163 923 ntBASIC15.81■□□□□ 0.12
APOC1P02654 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
APOC1P02654 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
APOC1P02654 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.81■□□□□ 0.12
APOC1P02654 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APOC1P02654 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
APOC1P02654 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.81■□□□□ 0.12
APOC1P02654 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.81■□□□□ 0.12
APOC1P02654 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.81■□□□□ 0.12
APOC1P02654 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
APOC1P02654 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
APOC1P02654 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
APOC1P02654 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.81■□□□□ 0.12
APOC1P02654 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.81■□□□□ 0.12
APOC1P02654 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APOC1P02654 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
APOC1P02654 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
APOC1P02654 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
APOC1P02654 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
APOC1P02654 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
APOC1P02654 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
APOC1P02654 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
APOC1P02654 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
APOC1P02654 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
APOC1P02654 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
APOC1P02654 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
APOC1P02654 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.8■□□□□ 0.12
APOC1P02654 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
APOC1P02654 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
APOC1P02654 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
APOC1P02654 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
APOC1P02654 LIN28AP1-201ENST00000429574 405 ntBASIC15.8■□□□□ 0.12
APOC1P02654 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
APOC1P02654 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.8■□□□□ 0.12
APOC1P02654 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.8■□□□□ 0.12
APOC1P02654 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.8■□□□□ 0.12
APOC1P02654 AC093827.2-201ENST00000512654 315 ntBASIC15.8■□□□□ 0.12
APOC1P02654 AC145285.6-201ENST00000604632 637 ntBASIC15.8■□□□□ 0.12
APOC1P02654 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
APOC1P02654 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
APOC1P02654 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
APOC1P02654 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
APOC1P02654 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
APOC1P02654 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.8■□□□□ 0.12
APOC1P02654 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
APOC1P02654 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
APOC1P02654 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
APOC1P02654 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.79■□□□□ 0.12
APOC1P02654 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
APOC1P02654 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
APOC1P02654 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.79■□□□□ 0.12
APOC1P02654 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
APOC1P02654 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
APOC1P02654 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.79■□□□□ 0.12
APOC1P02654 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
APOC1P02654 AC134043.2-201ENST00000624206 2238 ntBASIC15.79■□□□□ 0.12
APOC1P02654 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
APOC1P02654 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.79■□□□□ 0.12
APOC1P02654 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC15.79■□□□□ 0.12
APOC1P02654 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.79■□□□□ 0.12
APOC1P02654 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
APOC1P02654 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
APOC1P02654 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
APOC1P02654 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
APOC1P02654 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
APOC1P02654 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
APOC1P02654 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.79■□□□□ 0.12
APOC1P02654 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.79■□□□□ 0.12
APOC1P02654 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.79■□□□□ 0.12
APOC1P02654 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.79■□□□□ 0.12
APOC1P02654 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.79■□□□□ 0.12
APOC1P02654 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms