Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 AC008687.5-201ENST00000593746 558 ntBASIC16.07■□□□□ 0.16
HLA-DQA2P01906 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 KRT18P55-202ENST00000578578 1546 ntBASIC16.07■□□□□ 0.16
HLA-DQA2P01906 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-DQA2P01906 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-DQA2P01906 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-DQA2P01906 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-DQA2P01906 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-DQA2P01906 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
HLA-DQA2P01906 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
HLA-DQA2P01906 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.06■□□□□ 0.16
HLA-DQA2P01906 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-DQA2P01906 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-DQA2P01906 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-DQA2P01906 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.06■□□□□ 0.16
HLA-DQA2P01906 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.06■□□□□ 0.16
HLA-DQA2P01906 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-DQA2P01906 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-DQA2P01906 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-DQA2P01906 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
HLA-DQA2P01906 LINC01568-207ENST00000641790 1380 ntBASIC16.06■□□□□ 0.16
HLA-DQA2P01906 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-DQA2P01906 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-DQA2P01906 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-DQA2P01906 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-DQA2P01906 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
HLA-DQA2P01906 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-DQA2P01906 AP000523.1-201ENST00000398242 1049 ntBASIC16.06■□□□□ 0.16
HLA-DQA2P01906 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-DQA2P01906 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
HLA-DQA2P01906 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.06■□□□□ 0.16
HLA-DQA2P01906 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-DQA2P01906 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-DQA2P01906 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.06■□□□□ 0.16
HLA-DQA2P01906 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-DQA2P01906 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-DQA2P01906 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.06■□□□□ 0.16
HLA-DQA2P01906 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-DQA2P01906 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
HLA-DQA2P01906 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-DQA2P01906 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-DQA2P01906 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.06■□□□□ 0.16
HLA-DQA2P01906 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-DQA2P01906 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-DQA2P01906 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-DQA2P01906 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
HLA-DQA2P01906 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DQA2P01906 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.05■□□□□ 0.16
HLA-DQA2P01906 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DQA2P01906 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.05■□□□□ 0.16
HLA-DQA2P01906 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DQA2P01906 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DQA2P01906 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DQA2P01906 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DQA2P01906 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DQA2P01906 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DQA2P01906 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.05■□□□□ 0.16
HLA-DQA2P01906 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms