Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DRAP01903 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DRAP01903 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DRAP01903 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
HLA-DRAP01903 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DRAP01903 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DRAP01903 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.2■□□□□ 0.66
HLA-DRAP01903 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
HLA-DRAP01903 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DRAP01903 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DRAP01903 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DRAP01903 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DRAP01903 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
HLA-DRAP01903 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.19■□□□□ 0.66
HLA-DRAP01903 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
HLA-DRAP01903 AC138932.1-201ENST00000534164 6830 ntBASIC19.19■□□□□ 0.66
HLA-DRAP01903 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DRAP01903 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DRAP01903 AC096633.1-201ENST00000422446 749 ntBASIC19.19■□□□□ 0.66
HLA-DRAP01903 DDX43P3-201ENST00000441064 443 ntBASIC19.19■□□□□ 0.66
HLA-DRAP01903 LINC00265-3P-201ENST00000447588 903 ntBASIC19.19■□□□□ 0.66
HLA-DRAP01903 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.19■□□□□ 0.66
HLA-DRAP01903 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DRAP01903 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.19■□□□□ 0.66
HLA-DRAP01903 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.19■□□□□ 0.66
HLA-DRAP01903 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
HLA-DRAP01903 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.19■□□□□ 0.66
HLA-DRAP01903 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
HLA-DRAP01903 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.19■□□□□ 0.66
HLA-DRAP01903 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DRAP01903 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
HLA-DRAP01903 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
HLA-DRAP01903 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DRAP01903 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DRAP01903 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.19■□□□□ 0.66
HLA-DRAP01903 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.19■□□□□ 0.66
HLA-DRAP01903 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DRAP01903 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DRAP01903 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DRAP01903 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
HLA-DRAP01903 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
HLA-DRAP01903 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DRAP01903 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DRAP01903 AC125634.1-201ENST00000438758 1403 ntBASIC19.18■□□□□ 0.66
HLA-DRAP01903 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DRAP01903 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
HLA-DRAP01903 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DRAP01903 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DRAP01903 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DRAP01903 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DRAP01903 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
HLA-DRAP01903 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.18■□□□□ 0.66
HLA-DRAP01903 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DRAP01903 VENTXP7-201ENST00000475503 772 ntBASIC19.18■□□□□ 0.66
HLA-DRAP01903 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DRAP01903 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DRAP01903 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DRAP01903 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.18■□□□□ 0.66
HLA-DRAP01903 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.18■□□□□ 0.66
HLA-DRAP01903 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.18■□□□□ 0.66
HLA-DRAP01903 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DRAP01903 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
HLA-DRAP01903 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DRAP01903 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
HLA-DRAP01903 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DRAP01903 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DRAP01903 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DRAP01903 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
HLA-DRAP01903 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.17■□□□□ 0.66
HLA-DRAP01903 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.17■□□□□ 0.66
HLA-DRAP01903 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
HLA-DRAP01903 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DRAP01903 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
HLA-DRAP01903 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DRAP01903 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.17■□□□□ 0.66
HLA-DRAP01903 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DRAP01903 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DRAP01903 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DRAP01903 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.17■□□□□ 0.66
HLA-DRAP01903 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DRAP01903 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.17■□□□□ 0.66
HLA-DRAP01903 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DRAP01903 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
HLA-DRAP01903 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DRAP01903 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DRAP01903 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.17■□□□□ 0.66
HLA-DRAP01903 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.17■□□□□ 0.66
HLA-DRAP01903 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.17■□□□□ 0.66
HLA-DRAP01903 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.17■□□□□ 0.66
HLA-DRAP01903 AL138831.2-201ENST00000606564 490 ntBASIC19.17■□□□□ 0.66
HLA-DRAP01903 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
HLA-DRAP01903 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
HLA-DRAP01903 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DRAP01903 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DRAP01903 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.17■□□□□ 0.66
HLA-DRAP01903 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.17■□□□□ 0.66
HLA-DRAP01903 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DRAP01903 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DRAP01903 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DRAP01903 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms