Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TRBC1P01850 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRBC1P01850 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBC1P01850 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBC1P01850 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRBC1P01850 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBC1P01850 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRBC1P01850 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TRBC1P01850 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRBC1P01850 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBC1P01850 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TRBC1P01850 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBC1P01850 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TRBC1P01850 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBC1P01850 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TRBC1P01850 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
TRBC1P01850 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TRBC1P01850 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.88■□□□□ 0.45
TRBC1P01850 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TRBC1P01850 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.88■□□□□ 0.45
TRBC1P01850 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.88■□□□□ 0.45
TRBC1P01850 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBC1P01850 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBC1P01850 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.88■□□□□ 0.45
TRBC1P01850 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRBC1P01850 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
TRBC1P01850 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBC1P01850 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBC1P01850 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRBC1P01850 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.88■□□□□ 0.45
TRBC1P01850 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.88■□□□□ 0.45
TRBC1P01850 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.88■□□□□ 0.45
TRBC1P01850 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBC1P01850 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.88■□□□□ 0.45
TRBC1P01850 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.88■□□□□ 0.45
TRBC1P01850 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.88■□□□□ 0.45
TRBC1P01850 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.88■□□□□ 0.45
TRBC1P01850 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBC1P01850 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TRBC1P01850 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.88■□□□□ 0.45
TRBC1P01850 AC009949.1-201ENST00000623048 1830 ntBASIC17.88■□□□□ 0.45
TRBC1P01850 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBC1P01850 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.88■□□□□ 0.45
TRBC1P01850 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TRBC1P01850 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBC1P01850 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBC1P01850 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBC1P01850 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBC1P01850 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TRBC1P01850 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBC1P01850 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.88■□□□□ 0.45
TRBC1P01850 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBC1P01850 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.88■□□□□ 0.45
TRBC1P01850 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBC1P01850 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRBC1P01850 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.87■□□□□ 0.45
TRBC1P01850 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.87■□□□□ 0.45
TRBC1P01850 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
TRBC1P01850 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TRBC1P01850 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRBC1P01850 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBC1P01850 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBC1P01850 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBC1P01850 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBC1P01850 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.87■□□□□ 0.45
TRBC1P01850 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
TRBC1P01850 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRBC1P01850 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBC1P01850 NUS1P1-201ENST00000446295 882 ntBASIC17.87■□□□□ 0.45
TRBC1P01850 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TRBC1P01850 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.87■□□□□ 0.45
TRBC1P01850 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBC1P01850 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.87■□□□□ 0.45
TRBC1P01850 AC009533.2-201ENST00000543664 586 ntBASIC17.87■□□□□ 0.45
TRBC1P01850 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.87■□□□□ 0.45
TRBC1P01850 BNIP3P18-201ENST00000593976 575 ntBASIC17.87■□□□□ 0.45
TRBC1P01850 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
TRBC1P01850 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
TRBC1P01850 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBC1P01850 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBC1P01850 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TRBC1P01850 AC008764.6-201ENST00000595909 2069 ntBASIC17.87■□□□□ 0.45
TRBC1P01850 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBC1P01850 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBC1P01850 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBC1P01850 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBC1P01850 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TRBC1P01850 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBC1P01850 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBC1P01850 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBC1P01850 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRBC1P01850 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.86■□□□□ 0.45
TRBC1P01850 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRBC1P01850 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBC1P01850 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.86■□□□□ 0.45
TRBC1P01850 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBC1P01850 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRBC1P01850 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBC1P01850 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.86■□□□□ 0.45
TRBC1P01850 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms