Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TOMM40O96008 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TOMM40O96008 NARF-204ENST00000390006 1766 ntTSL 2 BASIC14.01□□□□□ -0.17
TOMM40O96008 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TOMM40O96008 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TOMM40O96008 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TOMM40O96008 AC103702.1-201ENST00000548801 2630 ntBASIC14.01□□□□□ -0.17
TOMM40O96008 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
TOMM40O96008 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TOMM40O96008 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TOMM40O96008 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TOMM40O96008 AC022898.2-201ENST00000616822 1312 ntBASIC14.01□□□□□ -0.17
TOMM40O96008 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TOMM40O96008 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TOMM40O96008 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC14.01□□□□□ -0.17
TOMM40O96008 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TOMM40O96008 GAD2-202ENST00000376248 680 ntTSL 5 BASIC14.01□□□□□ -0.17
TOMM40O96008 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TOMM40O96008 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
TOMM40O96008 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TOMM40O96008 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC14.01□□□□□ -0.17
TOMM40O96008 AC009947.2-201ENST00000444014 672 ntBASIC14.01□□□□□ -0.17
TOMM40O96008 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TOMM40O96008 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC14.01□□□□□ -0.17
TOMM40O96008 NEK4P2-201ENST00000580004 1012 ntBASIC14.01□□□□□ -0.17
TOMM40O96008 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TOMM40O96008 AC024243.1-201ENST00000609234 778 ntBASIC14.01□□□□□ -0.17
TOMM40O96008 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.01□□□□□ -0.17
TOMM40O96008 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
TOMM40O96008 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TOMM40O96008 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
TOMM40O96008 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.01□□□□□ -0.17
TOMM40O96008 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC14.01□□□□□ -0.17
TOMM40O96008 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TOMM40O96008 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TOMM40O96008 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TOMM40O96008 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TOMM40O96008 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TOMM40O96008 NFIC-211ENST00000641145 8399 ntBASIC14.01□□□□□ -0.17
TOMM40O96008 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TOMM40O96008 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TOMM40O96008 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TOMM40O96008 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TOMM40O96008 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
TOMM40O96008 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.01□□□□□ -0.17
TOMM40O96008 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TOMM40O96008 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TOMM40O96008 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TOMM40O96008 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14□□□□□ -0.17
TOMM40O96008 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TOMM40O96008 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TOMM40O96008 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TOMM40O96008 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
TOMM40O96008 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TOMM40O96008 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TOMM40O96008 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TOMM40O96008 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TOMM40O96008 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TOMM40O96008 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TOMM40O96008 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC14□□□□□ -0.17
TOMM40O96008 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TOMM40O96008 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC14□□□□□ -0.17
TOMM40O96008 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TOMM40O96008 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TOMM40O96008 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TOMM40O96008 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
TOMM40O96008 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TOMM40O96008 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
TOMM40O96008 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC14□□□□□ -0.17
TOMM40O96008 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC14□□□□□ -0.17
TOMM40O96008 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC14□□□□□ -0.17
TOMM40O96008 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TOMM40O96008 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC14□□□□□ -0.17
TOMM40O96008 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC14□□□□□ -0.17
TOMM40O96008 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC14□□□□□ -0.17
TOMM40O96008 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC14□□□□□ -0.17
TOMM40O96008 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
TOMM40O96008 GPX4-207ENST00000589115 812 ntTSL 2 BASIC14□□□□□ -0.17
TOMM40O96008 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC14□□□□□ -0.17
TOMM40O96008 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
TOMM40O96008 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TOMM40O96008 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TOMM40O96008 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14□□□□□ -0.17
TOMM40O96008 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TOMM40O96008 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14□□□□□ -0.17
TOMM40O96008 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TOMM40O96008 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC14□□□□□ -0.17
TOMM40O96008 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TOMM40O96008 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
TOMM40O96008 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TOMM40O96008 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
TOMM40O96008 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14□□□□□ -0.17
TOMM40O96008 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TOMM40O96008 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TOMM40O96008 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TOMM40O96008 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
TOMM40O96008 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TOMM40O96008 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14□□□□□ -0.17
TOMM40O96008 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TOMM40O96008 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms