Protein–RNA interactions for Protein: O75871

CEACAM4, Carcinoembryonic antigen-related cell adhesion molecule 4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4O75871 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CEACAM4O75871 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CEACAM4O75871 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CEACAM4O75871 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CEACAM4O75871 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CEACAM4O75871 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CEACAM4O75871 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.13■□□□□ 0.17
CEACAM4O75871 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CEACAM4O75871 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.13■□□□□ 0.17
CEACAM4O75871 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.13■□□□□ 0.17
CEACAM4O75871 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.13■□□□□ 0.17
CEACAM4O75871 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.13■□□□□ 0.17
CEACAM4O75871 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.13■□□□□ 0.17
CEACAM4O75871 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CEACAM4O75871 STK25P1-201ENST00000585406 838 ntBASIC16.13■□□□□ 0.17
CEACAM4O75871 AL596442.2-201ENST00000610240 980 ntBASIC16.13■□□□□ 0.17
CEACAM4O75871 AC004790.2-201ENST00000623588 572 ntBASIC16.13■□□□□ 0.17
CEACAM4O75871 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CEACAM4O75871 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CEACAM4O75871 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CEACAM4O75871 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.13■□□□□ 0.17
CEACAM4O75871 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CEACAM4O75871 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CEACAM4O75871 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CEACAM4O75871 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
CEACAM4O75871 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CEACAM4O75871 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.12■□□□□ 0.17
CEACAM4O75871 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.12■□□□□ 0.17
CEACAM4O75871 GPR89P-201ENST00000407924 1495 ntBASIC16.12■□□□□ 0.17
CEACAM4O75871 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.12■□□□□ 0.17
CEACAM4O75871 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CEACAM4O75871 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CEACAM4O75871 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CEACAM4O75871 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CEACAM4O75871 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.12■□□□□ 0.17
CEACAM4O75871 HTR5BP-201ENST00000430851 1154 ntBASIC16.12■□□□□ 0.17
CEACAM4O75871 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.12■□□□□ 0.17
CEACAM4O75871 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
CEACAM4O75871 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.12■□□□□ 0.17
CEACAM4O75871 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.12■□□□□ 0.17
CEACAM4O75871 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CEACAM4O75871 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.12■□□□□ 0.17
CEACAM4O75871 AC018845.2-201ENST00000568326 409 ntBASIC16.12■□□□□ 0.17
CEACAM4O75871 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.12■□□□□ 0.17
CEACAM4O75871 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.12■□□□□ 0.17
CEACAM4O75871 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.12■□□□□ 0.17
CEACAM4O75871 AC010654.1-201ENST00000615722 808 ntBASIC16.12■□□□□ 0.17
CEACAM4O75871 AL513190.1-201ENST00000621254 727 ntBASIC16.12■□□□□ 0.17
CEACAM4O75871 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CEACAM4O75871 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.12■□□□□ 0.17
CEACAM4O75871 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CEACAM4O75871 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
CEACAM4O75871 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CEACAM4O75871 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CEACAM4O75871 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CEACAM4O75871 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CEACAM4O75871 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CEACAM4O75871 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CEACAM4O75871 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CEACAM4O75871 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.12■□□□□ 0.17
CEACAM4O75871 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.12■□□□□ 0.17
CEACAM4O75871 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CEACAM4O75871 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.11■□□□□ 0.17
CEACAM4O75871 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CEACAM4O75871 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.11■□□□□ 0.17
CEACAM4O75871 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.11■□□□□ 0.17
CEACAM4O75871 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.11■□□□□ 0.17
CEACAM4O75871 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CEACAM4O75871 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CEACAM4O75871 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.11■□□□□ 0.17
CEACAM4O75871 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CEACAM4O75871 IGLL3P-201ENST00000412472 434 ntBASIC16.11■□□□□ 0.17
CEACAM4O75871 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CEACAM4O75871 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.11■□□□□ 0.17
CEACAM4O75871 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.11■□□□□ 0.17
CEACAM4O75871 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.11■□□□□ 0.17
CEACAM4O75871 SNHG9-202ENST00000564014 471 ntBASIC16.11■□□□□ 0.17
CEACAM4O75871 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
CEACAM4O75871 AC109462.3-201ENST00000573934 613 ntBASIC16.11■□□□□ 0.17
CEACAM4O75871 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
CEACAM4O75871 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.11■□□□□ 0.17
CEACAM4O75871 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.11■□□□□ 0.17
CEACAM4O75871 AC116407.2-201ENST00000613639 860 ntBASIC16.11■□□□□ 0.17
CEACAM4O75871 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.11■□□□□ 0.17
CEACAM4O75871 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CEACAM4O75871 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.11■□□□□ 0.17
CEACAM4O75871 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.11■□□□□ 0.17
CEACAM4O75871 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CEACAM4O75871 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CEACAM4O75871 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
CEACAM4O75871 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CEACAM4O75871 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CEACAM4O75871 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CEACAM4O75871 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.11■□□□□ 0.17
CEACAM4O75871 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CEACAM4O75871 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.1■□□□□ 0.17
CEACAM4O75871 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CEACAM4O75871 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CEACAM4O75871 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CEACAM4O75871 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms