Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX3O60493 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SNX3O60493 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.6■□□□□ 0.41
SNX3O60493 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX3O60493 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX3O60493 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SNX3O60493 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX3O60493 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX3O60493 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX3O60493 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX3O60493 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.59■□□□□ 0.41
SNX3O60493 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SNX3O60493 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX3O60493 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.59■□□□□ 0.41
SNX3O60493 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX3O60493 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SNX3O60493 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX3O60493 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX3O60493 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SNX3O60493 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SNX3O60493 AC016396.2-201ENST00000562575 1417 ntBASIC17.59■□□□□ 0.41
SNX3O60493 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.59■□□□□ 0.41
SNX3O60493 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX3O60493 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
SNX3O60493 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX3O60493 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SNX3O60493 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SNX3O60493 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX3O60493 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SNX3O60493 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SNX3O60493 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX3O60493 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SNX3O60493 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX3O60493 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
SNX3O60493 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX3O60493 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX3O60493 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SNX3O60493 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX3O60493 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX3O60493 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.59■□□□□ 0.41
SNX3O60493 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.59■□□□□ 0.41
SNX3O60493 AC007950.2-201ENST00000615045 2347 ntBASIC17.59■□□□□ 0.41
SNX3O60493 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX3O60493 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX3O60493 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.59■□□□□ 0.41
SNX3O60493 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX3O60493 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX3O60493 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.58■□□□□ 0.41
SNX3O60493 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.58■□□□□ 0.41
SNX3O60493 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SNX3O60493 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SNX3O60493 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.58■□□□□ 0.41
SNX3O60493 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SNX3O60493 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
SNX3O60493 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
SNX3O60493 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
SNX3O60493 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
SNX3O60493 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SNX3O60493 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SNX3O60493 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNX3O60493 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SNX3O60493 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SNX3O60493 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.58■□□□□ 0.4
SNX3O60493 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.58■□□□□ 0.4
SNX3O60493 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.58■□□□□ 0.4
SNX3O60493 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SNX3O60493 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SNX3O60493 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.58■□□□□ 0.4
SNX3O60493 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNX3O60493 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.58■□□□□ 0.4
SNX3O60493 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SNX3O60493 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
SNX3O60493 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.58■□□□□ 0.4
SNX3O60493 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SNX3O60493 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SNX3O60493 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.58■□□□□ 0.4
SNX3O60493 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SNX3O60493 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.57■□□□□ 0.4
SNX3O60493 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX3O60493 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.57■□□□□ 0.4
SNX3O60493 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.57■□□□□ 0.4
SNX3O60493 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.57■□□□□ 0.4
SNX3O60493 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX3O60493 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX3O60493 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SNX3O60493 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SNX3O60493 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SNX3O60493 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SNX3O60493 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.57■□□□□ 0.4
SNX3O60493 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.57■□□□□ 0.4
SNX3O60493 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX3O60493 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX3O60493 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SNX3O60493 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SNX3O60493 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX3O60493 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
SNX3O60493 MIR663A-201ENST00000385250 93 ntBASIC17.57■□□□□ 0.4
SNX3O60493 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.57■□□□□ 0.4
SNX3O60493 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.57■□□□□ 0.4
SNX3O60493 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms