Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PEX1O43933 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PEX1O43933 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.44■□□□□ 0.38
PEX1O43933 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.44■□□□□ 0.38
PEX1O43933 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.44■□□□□ 0.38
PEX1O43933 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.44■□□□□ 0.38
PEX1O43933 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
PEX1O43933 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.44■□□□□ 0.38
PEX1O43933 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.44■□□□□ 0.38
PEX1O43933 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PEX1O43933 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PEX1O43933 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PEX1O43933 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PEX1O43933 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PEX1O43933 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
PEX1O43933 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PEX1O43933 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PEX1O43933 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PEX1O43933 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PEX1O43933 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PEX1O43933 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PEX1O43933 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
PEX1O43933 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
PEX1O43933 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
PEX1O43933 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PEX1O43933 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PEX1O43933 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PEX1O43933 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.43■□□□□ 0.38
PEX1O43933 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PEX1O43933 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.43■□□□□ 0.38
PEX1O43933 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.43■□□□□ 0.38
PEX1O43933 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.43■□□□□ 0.38
PEX1O43933 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PEX1O43933 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.43■□□□□ 0.38
PEX1O43933 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PEX1O43933 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.43■□□□□ 0.38
PEX1O43933 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
PEX1O43933 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.43■□□□□ 0.38
PEX1O43933 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
PEX1O43933 AC006011.2-201ENST00000621313 1158 ntBASIC17.43■□□□□ 0.38
PEX1O43933 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PEX1O43933 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PEX1O43933 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
PEX1O43933 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PEX1O43933 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PEX1O43933 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PEX1O43933 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PEX1O43933 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PEX1O43933 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.42■□□□□ 0.38
PEX1O43933 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PEX1O43933 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PEX1O43933 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.42■□□□□ 0.38
PEX1O43933 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PEX1O43933 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
PEX1O43933 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.42■□□□□ 0.38
PEX1O43933 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PEX1O43933 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PEX1O43933 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PEX1O43933 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PEX1O43933 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PEX1O43933 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PEX1O43933 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PEX1O43933 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.42■□□□□ 0.38
PEX1O43933 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.42■□□□□ 0.38
PEX1O43933 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.42■□□□□ 0.38
PEX1O43933 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.42■□□□□ 0.38
PEX1O43933 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.42■□□□□ 0.38
PEX1O43933 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.42■□□□□ 0.38
PEX1O43933 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
PEX1O43933 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.42■□□□□ 0.38
PEX1O43933 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PEX1O43933 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PEX1O43933 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PEX1O43933 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PEX1O43933 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PEX1O43933 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.42■□□□□ 0.38
PEX1O43933 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PEX1O43933 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PEX1O43933 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
PEX1O43933 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PEX1O43933 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PEX1O43933 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.42■□□□□ 0.38
PEX1O43933 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
PEX1O43933 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.42■□□□□ 0.38
PEX1O43933 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PEX1O43933 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PEX1O43933 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PEX1O43933 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PEX1O43933 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PEX1O43933 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PEX1O43933 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PEX1O43933 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PEX1O43933 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PEX1O43933 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
PEX1O43933 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
PEX1O43933 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PEX1O43933 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PEX1O43933 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PEX1O43933 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PEX1O43933 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms