Protein–RNA interactions for Protein: O43889

CREB3, Cyclic AMP-responsive element-binding protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3O43889 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CREB3O43889 AC005332.1-201ENST00000577698 1310 ntBASIC18.65■□□□□ 0.58
CREB3O43889 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CREB3O43889 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CREB3O43889 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.65■□□□□ 0.58
CREB3O43889 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CREB3O43889 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CREB3O43889 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
CREB3O43889 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CREB3O43889 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CREB3O43889 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CREB3O43889 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CREB3O43889 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CREB3O43889 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CREB3O43889 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CREB3O43889 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.65■□□□□ 0.58
CREB3O43889 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CREB3O43889 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CREB3O43889 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CREB3O43889 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.64■□□□□ 0.58
CREB3O43889 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
CREB3O43889 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.64■□□□□ 0.57
CREB3O43889 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CREB3O43889 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CREB3O43889 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
CREB3O43889 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CREB3O43889 ARMC10P1-201ENST00000313754 855 ntBASIC18.64■□□□□ 0.57
CREB3O43889 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CREB3O43889 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CREB3O43889 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.64■□□□□ 0.57
CREB3O43889 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.64■□□□□ 0.57
CREB3O43889 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.64■□□□□ 0.57
CREB3O43889 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CREB3O43889 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.64■□□□□ 0.57
CREB3O43889 FAM86EP-206ENST00000510506 987 ntBASIC18.64■□□□□ 0.57
CREB3O43889 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.64■□□□□ 0.57
CREB3O43889 AL390719.2-201ENST00000606993 987 ntBASIC18.64■□□□□ 0.57
CREB3O43889 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.64■□□□□ 0.57
CREB3O43889 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CREB3O43889 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CREB3O43889 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CREB3O43889 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CREB3O43889 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CREB3O43889 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CREB3O43889 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.64■□□□□ 0.57
CREB3O43889 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CREB3O43889 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CREB3O43889 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CREB3O43889 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.63■□□□□ 0.57
CREB3O43889 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CREB3O43889 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
CREB3O43889 AL139384.1-201ENST00000612143 3047 ntBASIC18.63■□□□□ 0.57
CREB3O43889 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CREB3O43889 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.63■□□□□ 0.57
CREB3O43889 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CREB3O43889 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CREB3O43889 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.63■□□□□ 0.57
CREB3O43889 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CREB3O43889 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CREB3O43889 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CREB3O43889 AC011270.2-201ENST00000624293 2550 ntBASIC18.63■□□□□ 0.57
CREB3O43889 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CREB3O43889 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.63■□□□□ 0.57
CREB3O43889 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CREB3O43889 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.63■□□□□ 0.57
CREB3O43889 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.63■□□□□ 0.57
CREB3O43889 DUTP2-201ENST00000519164 463 ntBASIC18.63■□□□□ 0.57
CREB3O43889 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.63■□□□□ 0.57
CREB3O43889 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
CREB3O43889 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.63■□□□□ 0.57
CREB3O43889 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.63■□□□□ 0.57
CREB3O43889 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CREB3O43889 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CREB3O43889 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CREB3O43889 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.63■□□□□ 0.57
CREB3O43889 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.63■□□□□ 0.57
CREB3O43889 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CREB3O43889 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CREB3O43889 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CREB3O43889 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CREB3O43889 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.63■□□□□ 0.57
CREB3O43889 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CREB3O43889 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CREB3O43889 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CREB3O43889 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
CREB3O43889 AC100803.2-201ENST00000562459 1963 ntBASIC18.62■□□□□ 0.57
CREB3O43889 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CREB3O43889 AC008764.6-201ENST00000595909 2069 ntBASIC18.62■□□□□ 0.57
CREB3O43889 AC068880.1-201ENST00000507289 2297 ntBASIC18.62■□□□□ 0.57
CREB3O43889 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CREB3O43889 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CREB3O43889 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CREB3O43889 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CREB3O43889 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CREB3O43889 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.62■□□□□ 0.57
CREB3O43889 TSPY22P-201ENST00000427496 604 ntBASIC18.62■□□□□ 0.57
CREB3O43889 KRT18P65-201ENST00000439811 1286 ntBASIC18.62■□□□□ 0.57
CREB3O43889 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CREB3O43889 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CREB3O43889 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms