Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SNAI2O43623 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNAI2O43623 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNAI2O43623 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SNAI2O43623 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SNAI2O43623 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
SNAI2O43623 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
SNAI2O43623 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC13.4□□□□□ -0.26
SNAI2O43623 AP003097.1-201ENST00000530657 1135 ntBASIC13.4□□□□□ -0.26
SNAI2O43623 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC13.4□□□□□ -0.26
SNAI2O43623 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SNAI2O43623 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC13.4□□□□□ -0.26
SNAI2O43623 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC13.4□□□□□ -0.26
SNAI2O43623 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC13.4□□□□□ -0.26
SNAI2O43623 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
SNAI2O43623 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SNAI2O43623 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC13.4□□□□□ -0.26
SNAI2O43623 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNAI2O43623 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
SNAI2O43623 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
SNAI2O43623 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SNAI2O43623 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC13.4□□□□□ -0.26
SNAI2O43623 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC13.4□□□□□ -0.26
SNAI2O43623 NME9-203ENST00000383180 2133 ntTSL 2 BASIC13.4□□□□□ -0.26
SNAI2O43623 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC13.4□□□□□ -0.26
SNAI2O43623 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
SNAI2O43623 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
SNAI2O43623 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SNAI2O43623 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SNAI2O43623 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SNAI2O43623 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
SNAI2O43623 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
SNAI2O43623 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
SNAI2O43623 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.39□□□□□ -0.27
SNAI2O43623 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
SNAI2O43623 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC13.39□□□□□ -0.27
SNAI2O43623 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
SNAI2O43623 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC13.39□□□□□ -0.27
SNAI2O43623 KRT8P50-201ENST00000562022 1438 ntBASIC13.39□□□□□ -0.27
SNAI2O43623 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNAI2O43623 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
SNAI2O43623 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNAI2O43623 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNAI2O43623 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNAI2O43623 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
SNAI2O43623 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC13.39□□□□□ -0.27
SNAI2O43623 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
SNAI2O43623 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC13.39□□□□□ -0.27
SNAI2O43623 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNAI2O43623 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNAI2O43623 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNAI2O43623 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNAI2O43623 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC13.39□□□□□ -0.27
SNAI2O43623 GAS7-202ENST00000396115 929 ntTSL 5 BASIC13.39□□□□□ -0.27
SNAI2O43623 KSR1P1-201ENST00000446298 240 ntBASIC13.39□□□□□ -0.27
SNAI2O43623 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC13.39□□□□□ -0.27
SNAI2O43623 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNAI2O43623 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC13.39□□□□□ -0.27
SNAI2O43623 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNAI2O43623 AC026271.3-201ENST00000571884 352 ntBASIC13.39□□□□□ -0.27
SNAI2O43623 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC13.39□□□□□ -0.27
SNAI2O43623 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
SNAI2O43623 AL023875.1-201ENST00000640777 796 ntBASIC13.39□□□□□ -0.27
SNAI2O43623 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNAI2O43623 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNAI2O43623 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNAI2O43623 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC13.39□□□□□ -0.27
SNAI2O43623 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNAI2O43623 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
SNAI2O43623 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNAI2O43623 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC13.39□□□□□ -0.27
SNAI2O43623 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNAI2O43623 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC13.39□□□□□ -0.27
SNAI2O43623 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SNAI2O43623 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNAI2O43623 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNAI2O43623 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC13.39□□□□□ -0.27
SNAI2O43623 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNAI2O43623 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC13.39□□□□□ -0.27
SNAI2O43623 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
SNAI2O43623 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNAI2O43623 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
SNAI2O43623 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNAI2O43623 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNAI2O43623 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNAI2O43623 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNAI2O43623 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNAI2O43623 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SNAI2O43623 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
SNAI2O43623 HARS-201ENST00000307633 1780 ntTSL 2 BASIC13.38□□□□□ -0.27
SNAI2O43623 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNAI2O43623 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SNAI2O43623 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.38□□□□□ -0.27
SNAI2O43623 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
SNAI2O43623 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
SNAI2O43623 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
SNAI2O43623 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SNAI2O43623 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SNAI2O43623 SERF2-207ENST00000409614 582 ntTSL 2 BASIC13.38□□□□□ -0.27
SNAI2O43623 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms