Protein–RNA interactions for Protein: O14994

SYN3, Synapsin-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3O14994 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SYN3O14994 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.79■□□□□ 0.6
SYN3O14994 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SYN3O14994 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.79■□□□□ 0.6
SYN3O14994 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.79■□□□□ 0.6
SYN3O14994 AC092910.1-201ENST00000482027 1129 ntBASIC18.79■□□□□ 0.6
SYN3O14994 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.79■□□□□ 0.6
SYN3O14994 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.79■□□□□ 0.6
SYN3O14994 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.79■□□□□ 0.6
SYN3O14994 AC019129.2-201ENST00000609837 1235 ntBASIC18.79■□□□□ 0.6
SYN3O14994 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.79■□□□□ 0.6
SYN3O14994 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SYN3O14994 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.79■□□□□ 0.6
SYN3O14994 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYN3O14994 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYN3O14994 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYN3O14994 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYN3O14994 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYN3O14994 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.79■□□□□ 0.6
SYN3O14994 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYN3O14994 AC009949.1-201ENST00000623048 1830 ntBASIC18.79■□□□□ 0.6
SYN3O14994 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
SYN3O14994 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYN3O14994 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYN3O14994 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYN3O14994 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.78■□□□□ 0.6
SYN3O14994 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SYN3O14994 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYN3O14994 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYN3O14994 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYN3O14994 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYN3O14994 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYN3O14994 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYN3O14994 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYN3O14994 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SYN3O14994 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.78■□□□□ 0.6
SYN3O14994 AC098831.1-202ENST00000438821 336 ntBASIC18.78■□□□□ 0.6
SYN3O14994 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.78■□□□□ 0.6
SYN3O14994 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.78■□□□□ 0.6
SYN3O14994 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.78■□□□□ 0.6
SYN3O14994 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.78■□□□□ 0.6
SYN3O14994 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SYN3O14994 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYN3O14994 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.78■□□□□ 0.6
SYN3O14994 AC132938.5-201ENST00000624980 1813 ntBASIC18.78■□□□□ 0.6
SYN3O14994 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SYN3O14994 FLJ13224-201ENST00000313737 1514 ntBASIC18.78■□□□□ 0.6
SYN3O14994 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYN3O14994 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.78■□□□□ 0.6
SYN3O14994 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYN3O14994 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SYN3O14994 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYN3O14994 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.77■□□□□ 0.6
SYN3O14994 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SYN3O14994 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SYN3O14994 AC003669.1-201ENST00000334569 611 ntBASIC18.77■□□□□ 0.6
SYN3O14994 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SYN3O14994 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SYN3O14994 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.77■□□□□ 0.6
SYN3O14994 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SYN3O14994 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.77■□□□□ 0.6
SYN3O14994 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SYN3O14994 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
SYN3O14994 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
SYN3O14994 AC006557.2-201ENST00000592985 1240 ntBASIC18.77■□□□□ 0.6
SYN3O14994 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.77■□□□□ 0.6
SYN3O14994 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SYN3O14994 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.77■□□□□ 0.6
SYN3O14994 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYN3O14994 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SYN3O14994 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SYN3O14994 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.77■□□□□ 0.6
SYN3O14994 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.77■□□□□ 0.6
SYN3O14994 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SYN3O14994 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
SYN3O14994 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SYN3O14994 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.76■□□□□ 0.59
SYN3O14994 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SYN3O14994 AP000997.3-201ENST00000623333 2250 ntBASIC18.76■□□□□ 0.59
SYN3O14994 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.76■□□□□ 0.59
SYN3O14994 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.76■□□□□ 0.59
SYN3O14994 KRT18P55-202ENST00000578578 1546 ntBASIC18.76■□□□□ 0.59
SYN3O14994 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.76■□□□□ 0.59
SYN3O14994 AL020996.1-203ENST00000536896 2307 ntBASIC18.76■□□□□ 0.59
SYN3O14994 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYN3O14994 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYN3O14994 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYN3O14994 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.76■□□□□ 0.59
SYN3O14994 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.76■□□□□ 0.59
SYN3O14994 KLF4P1-201ENST00000412782 1185 ntBASIC18.76■□□□□ 0.59
SYN3O14994 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.76■□□□□ 0.59
SYN3O14994 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SYN3O14994 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
SYN3O14994 AL589182.2-201ENST00000619332 1049 ntBASIC18.76■□□□□ 0.59
SYN3O14994 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.76■□□□□ 0.59
SYN3O14994 AC004408.2-201ENST00000623613 2777 ntBASIC18.76■□□□□ 0.59
SYN3O14994 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYN3O14994 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYN3O14994 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.76■□□□□ 0.59
SYN3O14994 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms