Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
UPK2O00526 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.34□□□□□ -0.11
UPK2O00526 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK2O00526 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
UPK2O00526 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK2O00526 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK2O00526 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.34□□□□□ -0.11
UPK2O00526 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.34□□□□□ -0.11
UPK2O00526 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK2O00526 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UPK2O00526 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UPK2O00526 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.34□□□□□ -0.11
UPK2O00526 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
UPK2O00526 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.34□□□□□ -0.11
UPK2O00526 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
UPK2O00526 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
UPK2O00526 AC140113.3-201ENST00000605663 199 ntBASIC14.34□□□□□ -0.11
UPK2O00526 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
UPK2O00526 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.34□□□□□ -0.11
UPK2O00526 LINC01451-201ENST00000623792 534 ntBASIC14.34□□□□□ -0.11
UPK2O00526 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
UPK2O00526 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
UPK2O00526 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK2O00526 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.34□□□□□ -0.11
UPK2O00526 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK2O00526 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK2O00526 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK2O00526 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK2O00526 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK2O00526 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK2O00526 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.34□□□□□ -0.11
UPK2O00526 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UPK2O00526 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK2O00526 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UPK2O00526 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK2O00526 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC14.33□□□□□ -0.11
UPK2O00526 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
UPK2O00526 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
UPK2O00526 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
UPK2O00526 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
UPK2O00526 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.33□□□□□ -0.11
UPK2O00526 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.33□□□□□ -0.11
UPK2O00526 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
UPK2O00526 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.33□□□□□ -0.11
UPK2O00526 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
UPK2O00526 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UPK2O00526 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
UPK2O00526 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
UPK2O00526 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UPK2O00526 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.33□□□□□ -0.12
UPK2O00526 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UPK2O00526 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UPK2O00526 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UPK2O00526 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC14.33□□□□□ -0.12
UPK2O00526 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UPK2O00526 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC14.33□□□□□ -0.12
UPK2O00526 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC14.33□□□□□ -0.12
UPK2O00526 AL596275.1-201ENST00000423464 877 ntBASIC14.33□□□□□ -0.12
UPK2O00526 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC14.33□□□□□ -0.12
UPK2O00526 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UPK2O00526 DDX43P3-201ENST00000441064 443 ntBASIC14.33□□□□□ -0.12
UPK2O00526 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
UPK2O00526 RASA4DP-201ENST00000460726 1199 ntBASIC14.33□□□□□ -0.12
UPK2O00526 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UPK2O00526 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
UPK2O00526 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.33□□□□□ -0.12
UPK2O00526 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC14.33□□□□□ -0.12
UPK2O00526 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UPK2O00526 AL023973.1-201ENST00000624619 620 ntBASIC14.33□□□□□ -0.12
UPK2O00526 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UPK2O00526 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
UPK2O00526 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UPK2O00526 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
UPK2O00526 AC009949.1-201ENST00000623048 1830 ntBASIC14.33□□□□□ -0.12
UPK2O00526 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
UPK2O00526 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.33□□□□□ -0.12
UPK2O00526 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
UPK2O00526 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
UPK2O00526 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UPK2O00526 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
UPK2O00526 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
UPK2O00526 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
UPK2O00526 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC14.32□□□□□ -0.12
UPK2O00526 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.32□□□□□ -0.12
UPK2O00526 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
UPK2O00526 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
UPK2O00526 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
UPK2O00526 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UPK2O00526 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC14.32□□□□□ -0.12
UPK2O00526 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UPK2O00526 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.32□□□□□ -0.12
UPK2O00526 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
UPK2O00526 CD70-202ENST00000423145 881 ntTSL 2 BASIC14.32□□□□□ -0.12
UPK2O00526 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC14.32□□□□□ -0.12
UPK2O00526 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
UPK2O00526 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.32□□□□□ -0.12
UPK2O00526 DUT-205ENST00000558813 769 ntTSL 2 BASIC14.32□□□□□ -0.12
UPK2O00526 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC14.32□□□□□ -0.12
UPK2O00526 AC145285.6-201ENST00000604632 637 ntBASIC14.32□□□□□ -0.12
UPK2O00526 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms