Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDC7O00311 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDC7O00311 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.54■□□□□ 0.4
CDC7O00311 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDC7O00311 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDC7O00311 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CDC7O00311 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.53■□□□□ 0.4
CDC7O00311 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDC7O00311 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CDC7O00311 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDC7O00311 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CDC7O00311 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.53■□□□□ 0.4
CDC7O00311 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDC7O00311 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDC7O00311 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDC7O00311 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDC7O00311 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDC7O00311 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
CDC7O00311 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDC7O00311 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.53■□□□□ 0.4
CDC7O00311 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDC7O00311 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDC7O00311 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDC7O00311 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.53■□□□□ 0.4
CDC7O00311 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDC7O00311 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.53■□□□□ 0.4
CDC7O00311 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.53■□□□□ 0.4
CDC7O00311 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.53■□□□□ 0.4
CDC7O00311 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.53■□□□□ 0.4
CDC7O00311 RN7SL850P-201ENST00000579959 291 ntBASIC17.53■□□□□ 0.4
CDC7O00311 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.53■□□□□ 0.4
CDC7O00311 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.53■□□□□ 0.4
CDC7O00311 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.53■□□□□ 0.4
CDC7O00311 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.53■□□□□ 0.4
CDC7O00311 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDC7O00311 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.53■□□□□ 0.4
CDC7O00311 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDC7O00311 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDC7O00311 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.53■□□□□ 0.4
CDC7O00311 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
CDC7O00311 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDC7O00311 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDC7O00311 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDC7O00311 AC106820.2-201ENST00000563775 3264 ntBASIC17.53■□□□□ 0.4
CDC7O00311 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDC7O00311 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.53■□□□□ 0.4
CDC7O00311 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDC7O00311 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDC7O00311 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.52■□□□□ 0.4
CDC7O00311 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.52■□□□□ 0.4
CDC7O00311 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDC7O00311 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDC7O00311 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDC7O00311 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDC7O00311 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDC7O00311 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDC7O00311 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDC7O00311 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.52■□□□□ 0.4
CDC7O00311 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDC7O00311 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.52■□□□□ 0.4
CDC7O00311 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.52■□□□□ 0.4
CDC7O00311 SPDYE13P-201ENST00000445314 798 ntBASIC17.52■□□□□ 0.4
CDC7O00311 AC063952.2-201ENST00000498792 1227 ntBASIC17.52■□□□□ 0.4
CDC7O00311 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.52■□□□□ 0.4
CDC7O00311 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.52■□□□□ 0.4
CDC7O00311 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDC7O00311 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.52■□□□□ 0.4
CDC7O00311 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDC7O00311 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDC7O00311 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CDC7O00311 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDC7O00311 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDC7O00311 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CDC7O00311 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDC7O00311 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDC7O00311 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDC7O00311 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDC7O00311 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.52■□□□□ 0.39
CDC7O00311 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
CDC7O00311 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDC7O00311 AL353692.3-201ENST00000407031 1396 ntBASIC17.52■□□□□ 0.39
CDC7O00311 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDC7O00311 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDC7O00311 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.51■□□□□ 0.39
CDC7O00311 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDC7O00311 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDC7O00311 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.51■□□□□ 0.39
CDC7O00311 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDC7O00311 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDC7O00311 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDC7O00311 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDC7O00311 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDC7O00311 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDC7O00311 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDC7O00311 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDC7O00311 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDC7O00311 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDC7O00311 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDC7O00311 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDC7O00311 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms