Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.47■□□□□ 0.39
EIF3FO00303 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EIF3FO00303 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.47■□□□□ 0.39
EIF3FO00303 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
EIF3FO00303 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.47■□□□□ 0.39
EIF3FO00303 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
EIF3FO00303 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EIF3FO00303 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.47■□□□□ 0.39
EIF3FO00303 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
EIF3FO00303 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
EIF3FO00303 LINC00896-202ENST00000609602 2128 ntBASIC17.47■□□□□ 0.39
EIF3FO00303 HCG11-201ENST00000411553 5696 ntBASIC17.47■□□□□ 0.39
EIF3FO00303 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
EIF3FO00303 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
EIF3FO00303 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
EIF3FO00303 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.46■□□□□ 0.39
EIF3FO00303 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
EIF3FO00303 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
EIF3FO00303 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
EIF3FO00303 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
EIF3FO00303 FAM86EP-206ENST00000510506 987 ntBASIC17.46■□□□□ 0.39
EIF3FO00303 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.46■□□□□ 0.39
EIF3FO00303 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
EIF3FO00303 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
EIF3FO00303 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
EIF3FO00303 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
EIF3FO00303 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
EIF3FO00303 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.46■□□□□ 0.38
EIF3FO00303 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
EIF3FO00303 AC005332.1-201ENST00000577698 1310 ntBASIC17.46■□□□□ 0.38
EIF3FO00303 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EIF3FO00303 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
EIF3FO00303 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
EIF3FO00303 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
EIF3FO00303 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
EIF3FO00303 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
EIF3FO00303 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EIF3FO00303 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
EIF3FO00303 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
EIF3FO00303 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EIF3FO00303 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EIF3FO00303 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
EIF3FO00303 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EIF3FO00303 AC246785.2-201ENST00000432512 513 ntBASIC17.45■□□□□ 0.38
EIF3FO00303 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
EIF3FO00303 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
EIF3FO00303 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.45■□□□□ 0.38
EIF3FO00303 AL592071.1-201ENST00000611956 408 ntBASIC17.45■□□□□ 0.38
EIF3FO00303 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
EIF3FO00303 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
EIF3FO00303 HLA-J-201ENST00000462773 1622 ntBASIC17.45■□□□□ 0.38
EIF3FO00303 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
EIF3FO00303 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
EIF3FO00303 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
EIF3FO00303 LINC00304-203ENST00000565008 1864 ntBASIC17.45■□□□□ 0.38
EIF3FO00303 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EIF3FO00303 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.45■□□□□ 0.38
EIF3FO00303 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
EIF3FO00303 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
EIF3FO00303 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EIF3FO00303 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.45■□□□□ 0.38
EIF3FO00303 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
EIF3FO00303 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.45■□□□□ 0.38
EIF3FO00303 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.45■□□□□ 0.38
EIF3FO00303 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
EIF3FO00303 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EIF3FO00303 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
EIF3FO00303 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.44■□□□□ 0.38
EIF3FO00303 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
EIF3FO00303 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.44■□□□□ 0.38
EIF3FO00303 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EIF3FO00303 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EIF3FO00303 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EIF3FO00303 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EIF3FO00303 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EIF3FO00303 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EIF3FO00303 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.44■□□□□ 0.38
EIF3FO00303 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.44■□□□□ 0.38
EIF3FO00303 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EIF3FO00303 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
EIF3FO00303 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EIF3FO00303 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.44■□□□□ 0.38
EIF3FO00303 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.44■□□□□ 0.38
EIF3FO00303 AC005104.2-201ENST00000427818 678 ntBASIC17.44■□□□□ 0.38
EIF3FO00303 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.44■□□□□ 0.38
EIF3FO00303 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.44■□□□□ 0.38
EIF3FO00303 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EIF3FO00303 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
EIF3FO00303 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.44■□□□□ 0.38
EIF3FO00303 AL121672.3-201ENST00000608644 468 ntBASIC17.44■□□□□ 0.38
EIF3FO00303 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EIF3FO00303 AC116407.4-201ENST00000623319 1061 ntBASIC17.44■□□□□ 0.38
EIF3FO00303 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.44■□□□□ 0.38
EIF3FO00303 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
EIF3FO00303 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EIF3FO00303 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
EIF3FO00303 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
EIF3FO00303 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
EIF3FO00303 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
EIF3FO00303 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms