Protein–RNA interactions for Protein: O00213

APBB1, Amyloid-beta A4 precursor protein-binding family B member 1, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APBB1O00213 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
APBB1O00213 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC22.28■■□□□ 1.16
APBB1O00213 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
APBB1O00213 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
APBB1O00213 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
APBB1O00213 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
APBB1O00213 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
APBB1O00213 AC026471.1-201ENST00000564629 3026 ntBASIC22.28■■□□□ 1.16
APBB1O00213 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
APBB1O00213 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC22.27■■□□□ 1.16
APBB1O00213 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC22.27■■□□□ 1.16
APBB1O00213 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
APBB1O00213 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
APBB1O00213 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
APBB1O00213 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
APBB1O00213 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
APBB1O00213 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
APBB1O00213 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
APBB1O00213 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
APBB1O00213 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC22.27■■□□□ 1.16
APBB1O00213 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC22.27■■□□□ 1.16
APBB1O00213 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC22.27■■□□□ 1.16
APBB1O00213 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
APBB1O00213 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC22.27■■□□□ 1.16
APBB1O00213 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
APBB1O00213 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC22.27■■□□□ 1.16
APBB1O00213 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
APBB1O00213 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
APBB1O00213 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
APBB1O00213 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC22.27■■□□□ 1.16
APBB1O00213 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
APBB1O00213 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
APBB1O00213 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
APBB1O00213 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
APBB1O00213 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
APBB1O00213 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
APBB1O00213 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
APBB1O00213 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
APBB1O00213 HLA-DQB1-201ENST00000374943 1656 ntBASIC22.26■■□□□ 1.15
APBB1O00213 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC22.26■■□□□ 1.15
APBB1O00213 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
APBB1O00213 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC22.26■■□□□ 1.15
APBB1O00213 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
APBB1O00213 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
APBB1O00213 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
APBB1O00213 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC22.26■■□□□ 1.15
APBB1O00213 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
APBB1O00213 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
APBB1O00213 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC22.26■■□□□ 1.15
APBB1O00213 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC22.26■■□□□ 1.15
APBB1O00213 CNP-204ENST00000472031 1019 ntTSL 2 BASIC22.26■■□□□ 1.15
APBB1O00213 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
APBB1O00213 AC116407.4-201ENST00000623319 1061 ntBASIC22.26■■□□□ 1.15
APBB1O00213 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
APBB1O00213 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
APBB1O00213 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
APBB1O00213 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
APBB1O00213 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC22.26■■□□□ 1.15
APBB1O00213 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
APBB1O00213 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC22.26■■□□□ 1.15
APBB1O00213 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
APBB1O00213 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC22.26■■□□□ 1.15
APBB1O00213 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
APBB1O00213 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC22.26■■□□□ 1.15
APBB1O00213 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
APBB1O00213 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC22.25■■□□□ 1.15
APBB1O00213 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
APBB1O00213 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
APBB1O00213 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
APBB1O00213 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC22.25■■□□□ 1.15
APBB1O00213 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
APBB1O00213 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
APBB1O00213 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
APBB1O00213 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC22.25■■□□□ 1.15
APBB1O00213 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC22.25■■□□□ 1.15
APBB1O00213 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC22.25■■□□□ 1.15
APBB1O00213 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC22.25■■□□□ 1.15
APBB1O00213 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC22.25■■□□□ 1.15
APBB1O00213 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC22.25■■□□□ 1.15
APBB1O00213 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC22.25■■□□□ 1.15
APBB1O00213 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC22.25■■□□□ 1.15
APBB1O00213 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
APBB1O00213 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC22.25■■□□□ 1.15
APBB1O00213 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC22.25■■□□□ 1.15
APBB1O00213 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
APBB1O00213 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
APBB1O00213 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
APBB1O00213 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
APBB1O00213 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
APBB1O00213 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
APBB1O00213 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
APBB1O00213 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
APBB1O00213 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
APBB1O00213 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC22.24■■□□□ 1.15
APBB1O00213 NME9-203ENST00000383180 2133 ntTSL 2 BASIC22.24■■□□□ 1.15
APBB1O00213 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
APBB1O00213 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
APBB1O00213 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
APBB1O00213 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC22.24■■□□□ 1.15
APBB1O00213 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms