Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
YJEFN3A6XGL0 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
YJEFN3A6XGL0 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
YJEFN3A6XGL0 AL450487.1-201ENST00000426799 995 ntBASIC18.6■□□□□ 0.57
YJEFN3A6XGL0 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
YJEFN3A6XGL0 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
YJEFN3A6XGL0 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.6■□□□□ 0.57
YJEFN3A6XGL0 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
YJEFN3A6XGL0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.6■□□□□ 0.57
YJEFN3A6XGL0 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.6■□□□□ 0.57
YJEFN3A6XGL0 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
YJEFN3A6XGL0 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
YJEFN3A6XGL0 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
YJEFN3A6XGL0 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
YJEFN3A6XGL0 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
YJEFN3A6XGL0 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
YJEFN3A6XGL0 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
YJEFN3A6XGL0 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
YJEFN3A6XGL0 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
YJEFN3A6XGL0 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
YJEFN3A6XGL0 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
YJEFN3A6XGL0 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
YJEFN3A6XGL0 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.59■□□□□ 0.57
YJEFN3A6XGL0 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.59■□□□□ 0.57
YJEFN3A6XGL0 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
YJEFN3A6XGL0 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.59■□□□□ 0.57
YJEFN3A6XGL0 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.59■□□□□ 0.57
YJEFN3A6XGL0 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
YJEFN3A6XGL0 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.59■□□□□ 0.57
YJEFN3A6XGL0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
YJEFN3A6XGL0 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
YJEFN3A6XGL0 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
YJEFN3A6XGL0 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.59■□□□□ 0.57
YJEFN3A6XGL0 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
YJEFN3A6XGL0 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.59■□□□□ 0.57
YJEFN3A6XGL0 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.59■□□□□ 0.57
YJEFN3A6XGL0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
YJEFN3A6XGL0 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
YJEFN3A6XGL0 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
YJEFN3A6XGL0 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
YJEFN3A6XGL0 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.59■□□□□ 0.57
YJEFN3A6XGL0 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.59■□□□□ 0.57
YJEFN3A6XGL0 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
YJEFN3A6XGL0 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
YJEFN3A6XGL0 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
YJEFN3A6XGL0 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
YJEFN3A6XGL0 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
YJEFN3A6XGL0 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
YJEFN3A6XGL0 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
YJEFN3A6XGL0 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
YJEFN3A6XGL0 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
YJEFN3A6XGL0 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
YJEFN3A6XGL0 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.58■□□□□ 0.57
YJEFN3A6XGL0 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
YJEFN3A6XGL0 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.58■□□□□ 0.57
YJEFN3A6XGL0 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
YJEFN3A6XGL0 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
YJEFN3A6XGL0 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
YJEFN3A6XGL0 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.58■□□□□ 0.56
YJEFN3A6XGL0 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.58■□□□□ 0.56
YJEFN3A6XGL0 DDX43P3-201ENST00000441064 443 ntBASIC18.58■□□□□ 0.56
YJEFN3A6XGL0 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.58■□□□□ 0.56
YJEFN3A6XGL0 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.58■□□□□ 0.56
YJEFN3A6XGL0 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.58■□□□□ 0.56
YJEFN3A6XGL0 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
YJEFN3A6XGL0 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.58■□□□□ 0.56
YJEFN3A6XGL0 AL591684.3-201ENST00000605187 298 ntBASIC18.58■□□□□ 0.56
YJEFN3A6XGL0 IFNL4P1-201ENST00000607083 540 ntBASIC18.58■□□□□ 0.56
YJEFN3A6XGL0 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
YJEFN3A6XGL0 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
YJEFN3A6XGL0 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.58■□□□□ 0.56
YJEFN3A6XGL0 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.58■□□□□ 0.56
YJEFN3A6XGL0 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.58■□□□□ 0.56
YJEFN3A6XGL0 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
YJEFN3A6XGL0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
YJEFN3A6XGL0 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.58■□□□□ 0.56
YJEFN3A6XGL0 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
YJEFN3A6XGL0 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
YJEFN3A6XGL0 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
YJEFN3A6XGL0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.56
YJEFN3A6XGL0 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
YJEFN3A6XGL0 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
YJEFN3A6XGL0 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
YJEFN3A6XGL0 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
YJEFN3A6XGL0 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.57■□□□□ 0.56
YJEFN3A6XGL0 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
YJEFN3A6XGL0 AC006116.8-202ENST00000587620 1550 ntBASIC18.57■□□□□ 0.56
YJEFN3A6XGL0 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
YJEFN3A6XGL0 COX5BP2-201ENST00000392354 334 ntBASIC18.57■□□□□ 0.56
YJEFN3A6XGL0 FAM220CP-201ENST00000395253 831 ntBASIC18.57■□□□□ 0.56
YJEFN3A6XGL0 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.57■□□□□ 0.56
YJEFN3A6XGL0 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
YJEFN3A6XGL0 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
YJEFN3A6XGL0 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
YJEFN3A6XGL0 SLC25A6P5-201ENST00000435663 894 ntBASIC18.57■□□□□ 0.56
YJEFN3A6XGL0 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
YJEFN3A6XGL0 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.57■□□□□ 0.56
YJEFN3A6XGL0 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.57■□□□□ 0.56
YJEFN3A6XGL0 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.57■□□□□ 0.56
YJEFN3A6XGL0 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms