Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM88BA6NKF7 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM88BA6NKF7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.59■□□□□ 0.89
TMEM88BA6NKF7 PI4KAP1-204ENST00000612579 1703 ntBASIC20.59■□□□□ 0.89
TMEM88BA6NKF7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM88BA6NKF7 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM88BA6NKF7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.59■□□□□ 0.89
TMEM88BA6NKF7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM88BA6NKF7 LINC01006-201ENST00000333319 2292 ntBASIC20.59■□□□□ 0.89
TMEM88BA6NKF7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM88BA6NKF7 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM88BA6NKF7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM88BA6NKF7 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM88BA6NKF7 RBPMS2P1-201ENST00000437762 623 ntBASIC20.59■□□□□ 0.89
TMEM88BA6NKF7 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC20.59■□□□□ 0.89
TMEM88BA6NKF7 IGHV3-71-201ENST00000523324 359 ntBASIC20.59■□□□□ 0.89
TMEM88BA6NKF7 COQ9-214ENST00000567933 882 ntTSL 3 BASIC20.59■□□□□ 0.89
TMEM88BA6NKF7 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC20.59■□□□□ 0.89
TMEM88BA6NKF7 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM88BA6NKF7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM88BA6NKF7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM88BA6NKF7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM88BA6NKF7 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM88BA6NKF7 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.59■□□□□ 0.89
TMEM88BA6NKF7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM88BA6NKF7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.59■□□□□ 0.89
TMEM88BA6NKF7 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
TMEM88BA6NKF7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.58■□□□□ 0.89
TMEM88BA6NKF7 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM88BA6NKF7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
TMEM88BA6NKF7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM88BA6NKF7 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM88BA6NKF7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM88BA6NKF7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM88BA6NKF7 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.58■□□□□ 0.89
TMEM88BA6NKF7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM88BA6NKF7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM88BA6NKF7 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM88BA6NKF7 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM88BA6NKF7 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM88BA6NKF7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM88BA6NKF7 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC20.58■□□□□ 0.89
TMEM88BA6NKF7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC20.58■□□□□ 0.89
TMEM88BA6NKF7 GPR53P-205ENST00000457298 1084 ntBASIC20.58■□□□□ 0.89
TMEM88BA6NKF7 RN7SL589P-201ENST00000481268 310 ntBASIC20.58■□□□□ 0.89
TMEM88BA6NKF7 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC20.58■□□□□ 0.89
TMEM88BA6NKF7 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM88BA6NKF7 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM88BA6NKF7 AC099522.2-201ENST00000607001 744 ntBASIC20.58■□□□□ 0.89
TMEM88BA6NKF7 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM88BA6NKF7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
TMEM88BA6NKF7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.58■□□□□ 0.88
TMEM88BA6NKF7 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.58■□□□□ 0.88
TMEM88BA6NKF7 AC132938.6-201ENST00000623828 1655 ntBASIC20.58■□□□□ 0.88
TMEM88BA6NKF7 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TMEM88BA6NKF7 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
TMEM88BA6NKF7 AC097637.2-201ENST00000624096 1997 ntBASIC20.57■□□□□ 0.88
TMEM88BA6NKF7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM88BA6NKF7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM88BA6NKF7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.57■□□□□ 0.88
TMEM88BA6NKF7 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC20.57■□□□□ 0.88
TMEM88BA6NKF7 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM88BA6NKF7 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC20.57■□□□□ 0.88
TMEM88BA6NKF7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.57■□□□□ 0.88
TMEM88BA6NKF7 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM88BA6NKF7 U91328.1-201ENST00000437528 223 ntBASIC20.57■□□□□ 0.88
TMEM88BA6NKF7 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC20.57■□□□□ 0.88
TMEM88BA6NKF7 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC20.57■□□□□ 0.88
TMEM88BA6NKF7 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC20.57■□□□□ 0.88
TMEM88BA6NKF7 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC20.57■□□□□ 0.88
TMEM88BA6NKF7 IFT20-216ENST00000588477 774 ntTSL 5 BASIC20.57■□□□□ 0.88
TMEM88BA6NKF7 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
TMEM88BA6NKF7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM88BA6NKF7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM88BA6NKF7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM88BA6NKF7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM88BA6NKF7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM88BA6NKF7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM88BA6NKF7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.56■□□□□ 0.88
TMEM88BA6NKF7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.56■□□□□ 0.88
TMEM88BA6NKF7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM88BA6NKF7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM88BA6NKF7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
TMEM88BA6NKF7 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM88BA6NKF7 AC008677.1-201ENST00000519230 1561 ntBASIC20.56■□□□□ 0.88
TMEM88BA6NKF7 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.56■□□□□ 0.88
TMEM88BA6NKF7 CU639417.3-201ENST00000624240 1404 ntBASIC20.56■□□□□ 0.88
TMEM88BA6NKF7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM88BA6NKF7 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM88BA6NKF7 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC20.56■□□□□ 0.88
TMEM88BA6NKF7 AC097493.3-201ENST00000509725 367 ntBASIC20.56■□□□□ 0.88
TMEM88BA6NKF7 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC20.56■□□□□ 0.88
TMEM88BA6NKF7 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC20.56■□□□□ 0.88
TMEM88BA6NKF7 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC20.56■□□□□ 0.88
TMEM88BA6NKF7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC20.56■□□□□ 0.88
TMEM88BA6NKF7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.56■□□□□ 0.88
TMEM88BA6NKF7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TMEM88BA6NKF7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.56■□□□□ 0.88
TMEM88BA6NKF7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM88BA6NKF7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms