Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC85CA6NKD9 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC85CA6NKD9 GNAS-203ENST00000306120 1878 ntBASIC19.59■□□□□ 0.73
CCDC85CA6NKD9 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC85CA6NKD9 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CCDC85CA6NKD9 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC19.59■□□□□ 0.73
CCDC85CA6NKD9 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC85CA6NKD9 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC85CA6NKD9 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC85CA6NKD9 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC85CA6NKD9 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC85CA6NKD9 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC19.59■□□□□ 0.73
CCDC85CA6NKD9 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC85CA6NKD9 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CCDC85CA6NKD9 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC85CA6NKD9 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC85CA6NKD9 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC85CA6NKD9 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC85CA6NKD9 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC85CA6NKD9 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC85CA6NKD9 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC85CA6NKD9 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.58■□□□□ 0.73
CCDC85CA6NKD9 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC85CA6NKD9 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CCDC85CA6NKD9 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC85CA6NKD9 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC85CA6NKD9 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC85CA6NKD9 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC19.58■□□□□ 0.72
CCDC85CA6NKD9 ACTBP11-201ENST00000436287 1126 ntBASIC19.58■□□□□ 0.72
CCDC85CA6NKD9 KRT223P-202ENST00000449164 1292 ntBASIC19.58■□□□□ 0.72
CCDC85CA6NKD9 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC85CA6NKD9 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC85CA6NKD9 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.58■□□□□ 0.72
CCDC85CA6NKD9 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC19.58■□□□□ 0.72
CCDC85CA6NKD9 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.58■□□□□ 0.72
CCDC85CA6NKD9 AC133552.6-201ENST00000613406 534 ntBASIC19.58■□□□□ 0.72
CCDC85CA6NKD9 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CCDC85CA6NKD9 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CCDC85CA6NKD9 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CCDC85CA6NKD9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC85CA6NKD9 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CCDC85CA6NKD9 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC19.57■□□□□ 0.72
CCDC85CA6NKD9 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC85CA6NKD9 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC85CA6NKD9 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CCDC85CA6NKD9 AC020907.5-201ENST00000624372 1936 ntBASIC19.57■□□□□ 0.72
CCDC85CA6NKD9 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC85CA6NKD9 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.57■□□□□ 0.72
CCDC85CA6NKD9 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC85CA6NKD9 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC85CA6NKD9 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CCDC85CA6NKD9 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC85CA6NKD9 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CCDC85CA6NKD9 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.57■□□□□ 0.72
CCDC85CA6NKD9 TSSK5P-201ENST00000423978 907 ntBASIC19.57■□□□□ 0.72
CCDC85CA6NKD9 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
CCDC85CA6NKD9 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.57■□□□□ 0.72
CCDC85CA6NKD9 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC85CA6NKD9 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC19.57■□□□□ 0.72
CCDC85CA6NKD9 LINC01225-203ENST00000563550 1244 ntBASIC19.57■□□□□ 0.72
CCDC85CA6NKD9 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC85CA6NKD9 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
CCDC85CA6NKD9 AL512343.1-201ENST00000605837 169 ntBASIC19.57■□□□□ 0.72
CCDC85CA6NKD9 AC019129.2-201ENST00000609837 1235 ntBASIC19.57■□□□□ 0.72
CCDC85CA6NKD9 AC073592.8-201ENST00000624126 511 ntBASIC19.57■□□□□ 0.72
CCDC85CA6NKD9 COX11-210ENST00000639671 696 ntBASIC19.57■□□□□ 0.72
CCDC85CA6NKD9 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC85CA6NKD9 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC85CA6NKD9 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC85CA6NKD9 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC85CA6NKD9 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CCDC85CA6NKD9 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC85CA6NKD9 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC85CA6NKD9 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC85CA6NKD9 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC85CA6NKD9 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC85CA6NKD9 AC132938.5-201ENST00000624980 1813 ntBASIC19.56■□□□□ 0.72
CCDC85CA6NKD9 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.56■□□□□ 0.72
CCDC85CA6NKD9 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
CCDC85CA6NKD9 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC85CA6NKD9 KLF4P1-201ENST00000412782 1185 ntBASIC19.56■□□□□ 0.72
CCDC85CA6NKD9 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC85CA6NKD9 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC85CA6NKD9 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.56■□□□□ 0.72
CCDC85CA6NKD9 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC85CA6NKD9 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC85CA6NKD9 AP005482.1-201ENST00000563722 1273 ntBASIC19.56■□□□□ 0.72
CCDC85CA6NKD9 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC85CA6NKD9 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC85CA6NKD9 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CCDC85CA6NKD9 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC85CA6NKD9 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC85CA6NKD9 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC85CA6NKD9 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC85CA6NKD9 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC85CA6NKD9 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC85CA6NKD9 SDHAP2-201ENST00000455183 2001 ntBASIC19.56■□□□□ 0.72
CCDC85CA6NKD9 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC85CA6NKD9 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC85CA6NKD9 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms