Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 AC020763.4-201ENST00000623414 4170 ntBASIC17.55■□□□□ 0.4
TRBV5-4A0A0C4DH59 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV5-4A0A0C4DH59 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TRBV5-4A0A0C4DH59 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV5-4A0A0C4DH59 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.55■□□□□ 0.4
TRBV5-4A0A0C4DH59 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV5-4A0A0C4DH59 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV5-4A0A0C4DH59 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV5-4A0A0C4DH59 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV5-4A0A0C4DH59 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
TRBV5-4A0A0C4DH59 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV5-4A0A0C4DH59 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
TRBV5-4A0A0C4DH59 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.55■□□□□ 0.4
TRBV5-4A0A0C4DH59 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TRBV5-4A0A0C4DH59 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV5-4A0A0C4DH59 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV5-4A0A0C4DH59 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.55■□□□□ 0.4
TRBV5-4A0A0C4DH59 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV5-4A0A0C4DH59 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
TRBV5-4A0A0C4DH59 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV5-4A0A0C4DH59 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.55■□□□□ 0.4
TRBV5-4A0A0C4DH59 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.55■□□□□ 0.4
TRBV5-4A0A0C4DH59 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV5-4A0A0C4DH59 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV5-4A0A0C4DH59 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TRBV5-4A0A0C4DH59 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.54■□□□□ 0.4
TRBV5-4A0A0C4DH59 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV5-4A0A0C4DH59 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
TRBV5-4A0A0C4DH59 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV5-4A0A0C4DH59 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
TRBV5-4A0A0C4DH59 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV5-4A0A0C4DH59 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV5-4A0A0C4DH59 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TRBV5-4A0A0C4DH59 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TRBV5-4A0A0C4DH59 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV5-4A0A0C4DH59 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV5-4A0A0C4DH59 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV5-4A0A0C4DH59 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TRBV5-4A0A0C4DH59 FAM220CP-201ENST00000395253 831 ntBASIC17.54■□□□□ 0.4
TRBV5-4A0A0C4DH59 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV5-4A0A0C4DH59 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.54■□□□□ 0.4
TRBV5-4A0A0C4DH59 AC104819.1-201ENST00000504587 486 ntBASIC17.54■□□□□ 0.4
TRBV5-4A0A0C4DH59 AP000867.3-201ENST00000524675 377 ntBASIC17.54■□□□□ 0.4
TRBV5-4A0A0C4DH59 AC074051.2-201ENST00000565115 352 ntBASIC17.54■□□□□ 0.4
TRBV5-4A0A0C4DH59 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.54■□□□□ 0.4
TRBV5-4A0A0C4DH59 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.54■□□□□ 0.4
TRBV5-4A0A0C4DH59 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV5-4A0A0C4DH59 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.54■□□□□ 0.4
TRBV5-4A0A0C4DH59 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV5-4A0A0C4DH59 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV5-4A0A0C4DH59 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV5-4A0A0C4DH59 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.53■□□□□ 0.4
TRBV5-4A0A0C4DH59 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TRBV5-4A0A0C4DH59 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.53■□□□□ 0.4
TRBV5-4A0A0C4DH59 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV5-4A0A0C4DH59 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV5-4A0A0C4DH59 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
TRBV5-4A0A0C4DH59 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV5-4A0A0C4DH59 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV5-4A0A0C4DH59 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TRBV5-4A0A0C4DH59 TP73-AS1-210ENST00000637775 1455 ntBASIC17.53■□□□□ 0.4
TRBV5-4A0A0C4DH59 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV5-4A0A0C4DH59 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV5-4A0A0C4DH59 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
TRBV5-4A0A0C4DH59 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV5-4A0A0C4DH59 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV5-4A0A0C4DH59 AC002558.1-201ENST00000488906 803 ntBASIC17.53■□□□□ 0.4
TRBV5-4A0A0C4DH59 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.53■□□□□ 0.4
TRBV5-4A0A0C4DH59 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.53■□□□□ 0.4
TRBV5-4A0A0C4DH59 AC019129.2-201ENST00000609837 1235 ntBASIC17.53■□□□□ 0.4
TRBV5-4A0A0C4DH59 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV5-4A0A0C4DH59 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV5-4A0A0C4DH59 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.53■□□□□ 0.4
TRBV5-4A0A0C4DH59 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV5-4A0A0C4DH59 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV5-4A0A0C4DH59 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV5-4A0A0C4DH59 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV5-4A0A0C4DH59 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV5-4A0A0C4DH59 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV5-4A0A0C4DH59 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV5-4A0A0C4DH59 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV5-4A0A0C4DH59 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV5-4A0A0C4DH59 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV5-4A0A0C4DH59 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.52■□□□□ 0.4
TRBV5-4A0A0C4DH59 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV5-4A0A0C4DH59 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.52■□□□□ 0.4
TRBV5-4A0A0C4DH59 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV5-4A0A0C4DH59 PCDHB18P-201ENST00000524813 2368 ntBASIC17.52■□□□□ 0.4
TRBV5-4A0A0C4DH59 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV5-4A0A0C4DH59 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.52■□□□□ 0.4
TRBV5-4A0A0C4DH59 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV5-4A0A0C4DH59 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.52■□□□□ 0.4
TRBV5-4A0A0C4DH59 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TRBV5-4A0A0C4DH59 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TRBV5-4A0A0C4DH59 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.52■□□□□ 0.4
TRBV5-4A0A0C4DH59 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV5-4A0A0C4DH59 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.52■□□□□ 0.4
TRBV5-4A0A0C4DH59 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV5-4A0A0C4DH59 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV5-4A0A0C4DH59 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms